Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G55290.1 | Thale cress | cytosol | 92.47 | 92.14 |
| AT3G46170.1 | Thale cress | cytosol, extracellular, peroxisome | 86.02 | 83.33 |
| AT1G62610.4 | Thale cress | cytosol, nucleus, peroxisome | 80.65 | 79.79 |
| AT1G63380.2 | Thale cress | cytosol | 79.93 | 77.7 |
| AT2G17845.1 | Thale cress | golgi, peroxisome, plastid | 79.57 | 71.15 |
| PGSC0003DMT400030315 | Potato | nucleus, peroxisome, plastid | 66.67 | 68.63 |
| PGSC0003DMT400096536 | Potato | cytosol, nucleus, peroxisome | 55.56 | 67.39 |
| PGSC0003DMT400030316 | Potato | nucleus, peroxisome, plastid | 63.44 | 65.56 |
| Solyc12g100220.1.1 | Tomato | plastid | 63.44 | 65.31 |
| PGSC0003DMT400064364 | Potato | peroxisome, plastid, vacuole | 31.54 | 65.19 |
| PGSC0003DMT400088158 | Potato | cytosol | 58.78 | 63.81 |
| PGSC0003DMT400061270 | Potato | cytosol, nucleus, peroxisome | 61.65 | 63.24 |
| Solyc10g080890.1.1 | Tomato | cytosol | 65.23 | 62.76 |
| PGSC0003DMT400036566 | Potato | cytosol, extracellular, nucleus | 20.43 | 62.64 |
| PGSC0003DMT400072205 | Potato | cytosol | 64.87 | 62.41 |
| KRH71621 | Soybean | cytosol | 63.08 | 62.41 |
| PGSC0003DMT400092434 | Potato | cytosol, nucleus, peroxisome | 60.22 | 62.22 |
| PGSC0003DMT400036569 | Potato | nucleus, peroxisome, plastid | 59.86 | 61.62 |
| Solyc12g045030.1.1 | Tomato | nucleus | 59.5 | 61.25 |
| VIT_08s0040g01190.t01 | Wine grape | cytosol | 62.72 | 61.19 |
| Solyc10g080900.1.1 | Tomato | plastid | 62.37 | 60.63 |
| PGSC0003DMT400083885 | Potato | nucleus, peroxisome, plastid | 58.78 | 60.52 |
| KRH71588 | Soybean | cytosol | 60.93 | 60.28 |
| Solyc12g044940.1.1 | Tomato | nucleus | 58.42 | 60.15 |
| Solyc10g006860.2.1 | Tomato | plastid | 59.5 | 60.14 |
| VIT_08s0040g01200.t01 | Wine grape | cytosol | 60.93 | 59.44 |
| Os08t0510400-01 | Rice | plastid | 59.86 | 58.8 |
| TraesCS2A01G528100.1 | Wheat | cytosol, peroxisome, plastid | 58.78 | 58.78 |
| EES14264 | Sorghum | cytosol, plastid | 58.78 | 58.78 |
| Zm00001d031453_P001 | Maize | cytosol | 58.78 | 58.57 |
| TraesCS2D01G531000.1 | Wheat | plastid | 58.06 | 58.06 |
| TraesCS7D01G245700.1 | Wheat | cytosol | 58.78 | 57.95 |
| TraesCS7A01G246900.1 | Wheat | plastid | 58.42 | 57.6 |
| TraesCS7A01G427800.1 | Wheat | mitochondrion | 57.35 | 57.35 |
| TraesCS7B01G144400.1 | Wheat | cytosol | 58.06 | 57.24 |
| PGSC0003DMT400062814 | Potato | cytosol | 19.71 | 55.0 |
| HORVU7Hr1G050760.2 | Barley | vacuole | 58.78 | 52.56 |
| HORVU2Hr1G116450.1 | Barley | plastid | 56.63 | 49.84 |
| Solyc12g036510.1.1 | Tomato | cytosol | 40.86 | 48.31 |
| KRH76339 | Soybean | cytosol | 19.35 | 47.79 |
| VIT_08s0040g01210.t01 | Wine grape | cytosol | 45.52 | 44.88 |
| AT3G01980.3 | Thale cress | cytosol | 29.03 | 27.36 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:824697 | UniProt:A0A178VL98 | ProteinID:AEE79367.1 | EMBL:AK176259 |
| ArrayExpress:AT3G55310 | EnsemblPlantsGene:AT3G55310 | RefSeq:AT3G55310 | TAIR:AT3G55310 | RefSeq:AT3G55310-TAIR-G | EnsemblPlants:AT3G55310.1 |
| TAIR:AT3G55310.1 | Unigene:At.71318 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_191091.2 |
| ProteinID:OAP05612.1 | PFAM:PF00106 | PO:PO:0000293 | PO:PO:0009025 | PRINTS:PR00080 | PRINTS:PR00081 |
| ScanProsite:PS00061 | PANTHER:PTHR44375 | PANTHER:PTHR44375:SF1 | UniProt:Q67Z59 | InterPro:SDR_fam | SUPFAM:SSF51735 |
| InterPro:Sc_DH/Rdtase_CS | UniParc:UPI000042BBDE | : | : | : | : |
Description
Beta-ketoacyl-ACP reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q67Z59]
Coordinates
chr3:+:20505743..20507025
Molecular Weight (calculated)
30096.4 Da
IEP (calculated)
8.112
GRAVY (calculated)
0.096
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNHQTVLKQ LEPWCELKDK VVLVTGASSG IGREICLDLA KAGCQVIAAA RRVDRLNSLC SEINSFSSTG IQAAALELDV SSDAATIQKA VREAWDIFGK
101: IDALINNAGI RGNVKLSLDL SEDEWDNVFN TNLKGPWLVA KYVCVLMRDA KRGGSVINIS SVAGVRSIVP GGLAYSCSKG GVDTMSRMMA IELGVHKIRV
201: NSIAPGLFKS EITQALMQKE WLKNVTERTV PLKVQQTIDP GLTSLVRYLI HDSSQYISGN TYIVDSGATL PGVPIFSSL
101: IDALINNAGI RGNVKLSLDL SEDEWDNVFN TNLKGPWLVA KYVCVLMRDA KRGGSVINIS SVAGVRSIVP GGLAYSCSKG GVDTMSRMMA IELGVHKIRV
201: NSIAPGLFKS EITQALMQKE WLKNVTERTV PLKVQQTIDP GLTSLVRYLI HDSSQYISGN TYIVDSGATL PGVPIFSSL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.