Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G62610.4 | Thale cress | cytosol, nucleus, peroxisome | 93.03 | 94.68 |
| AT3G55290.1 | Thale cress | cytosol | 80.14 | 82.14 |
| CDY03343 | Canola | cytosol, nucleus, peroxisome | 78.75 | 80.71 |
| AT3G55310.1 | Thale cress | cytosol | 77.7 | 79.93 |
| Bra036706.1-P | Field mustard | cytosol | 79.44 | 79.44 |
| CDY48725 | Canola | cytosol, peroxisome, plastid | 79.09 | 79.09 |
| AT3G46170.1 | Thale cress | cytosol, extracellular, peroxisome | 78.4 | 78.12 |
| AT2G17845.1 | Thale cress | golgi, peroxisome, plastid | 74.22 | 68.27 |
| PGSC0003DMT400036566 | Potato | cytosol, extracellular, nucleus | 21.25 | 67.03 |
| PGSC0003DMT400092434 | Potato | cytosol, nucleus, peroxisome | 60.28 | 64.07 |
| PGSC0003DMT400096536 | Potato | cytosol, nucleus, peroxisome | 51.22 | 63.91 |
| PGSC0003DMT400030315 | Potato | nucleus, peroxisome, plastid | 60.28 | 63.84 |
| PGSC0003DMT400064364 | Potato | peroxisome, plastid, vacuole | 29.62 | 62.96 |
| PGSC0003DMT400088158 | Potato | cytosol | 56.1 | 62.65 |
| KRH71621 | Soybean | cytosol | 61.32 | 62.41 |
| PGSC0003DMT400030316 | Potato | nucleus, peroxisome, plastid | 58.19 | 61.85 |
| KRH71588 | Soybean | cytosol | 60.63 | 61.7 |
| Solyc12g100220.1.1 | Tomato | plastid | 58.19 | 61.62 |
| VIT_08s0040g01200.t01 | Wine grape | cytosol | 61.32 | 61.54 |
| PGSC0003DMT400061270 | Potato | cytosol, nucleus, peroxisome | 58.19 | 61.4 |
| Solyc10g080890.1.1 | Tomato | cytosol | 62.02 | 61.38 |
| VIT_08s0040g01190.t01 | Wine grape | cytosol | 60.98 | 61.19 |
| PGSC0003DMT400072205 | Potato | cytosol | 61.67 | 61.03 |
| Os08t0510400-01 | Rice | plastid | 58.54 | 59.15 |
| EES14264 | Sorghum | cytosol, plastid | 57.49 | 59.14 |
| TraesCS7A01G427800.1 | Wheat | mitochondrion | 57.49 | 59.14 |
| PGSC0003DMT400062814 | Potato | cytosol | 20.56 | 59.0 |
| Solyc10g006860.2.1 | Tomato | plastid | 56.45 | 58.7 |
| Solyc12g045030.1.1 | Tomato | nucleus | 55.4 | 58.67 |
| TraesCS7D01G245700.1 | Wheat | cytosol | 57.84 | 58.66 |
| Solyc10g080900.1.1 | Tomato | plastid | 58.54 | 58.54 |
| TraesCS7A01G246900.1 | Wheat | plastid | 57.49 | 58.3 |
| PGSC0003DMT400036569 | Potato | nucleus, peroxisome, plastid | 55.05 | 58.3 |
| Solyc12g044940.1.1 | Tomato | nucleus | 55.05 | 58.3 |
| Zm00001d031453_P001 | Maize | cytosol | 56.79 | 58.21 |
| PGSC0003DMT400083885 | Potato | nucleus, peroxisome, plastid | 54.7 | 57.93 |
| TraesCS2A01G528100.1 | Wheat | cytosol, peroxisome, plastid | 55.75 | 57.35 |
| TraesCS7B01G144400.1 | Wheat | cytosol | 56.45 | 57.24 |
| TraesCS2D01G531000.1 | Wheat | plastid | 54.36 | 55.91 |
| HORVU7Hr1G050760.2 | Barley | vacuole | 57.84 | 53.21 |
| HORVU2Hr1G116450.1 | Barley | plastid | 54.36 | 49.21 |
| Solyc12g036510.1.1 | Tomato | cytosol | 38.68 | 47.03 |
| VIT_08s0040g01210.t01 | Wine grape | cytosol | 44.6 | 45.23 |
| KRH76339 | Soybean | cytosol | 17.07 | 43.36 |
| AT3G01980.3 | Thale cress | cytosol | 27.53 | 26.69 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:842644 | ProteinID:AAF19703.1 | ProteinID:AEE34093.2 | ArrayExpress:AT1G63380 |
| EnsemblPlantsGene:AT1G63380 | RefSeq:AT1G63380 | TAIR:AT1G63380 | RefSeq:AT1G63380-TAIR-G | EnsemblPlants:AT1G63380.2 | TAIR:AT1G63380.2 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_001319302.1 | PFAM:PF00106 |
| PO:PO:0000293 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR44375 | PANTHER:PTHR44375:SF1 |
| UniProt:Q9SH24 | InterPro:SDR_fam | SMART:SM00822 | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI00000483EC |
| SEG:seg | : | : | : | : | : |
Description
F2K11.24 [Source:UniProtKB/TrEMBL;Acc:Q9SH24]
Coordinates
chr1:+:23505250..23506510
Molecular Weight (calculated)
31330.3 Da
IEP (calculated)
8.474
GRAVY (calculated)
0.131
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MIVCFFCGQK QVLKQLEPWC ELKDKVVLVT GASSGIGREI CLDLCKAGCK IVAAARRVDR LNSLCSEINS FGAIGVQAVA LELDVSSEAD TIRKAVKEAW
101: ETFGKIDVLI NNAGIRGNVK SSLDLSEEEW DKVFRTNLTG SWLISKYVCL LMRDAERGGS VINVSSISGL HRGLLRGGLA YACSKGGVDT MTRMMAIELA
201: VYKIRVNSIA PGIFRSEITQ GLFQKEWLKK VTEKVVPLKM QQTVDPGLTS LVRYLIHDSS QYVTGNTYIV DSGTTLPGVP IFSSLSP
101: ETFGKIDVLI NNAGIRGNVK SSLDLSEEEW DKVFRTNLTG SWLISKYVCL LMRDAERGGS VINVSSISGL HRGLLRGGLA YACSKGGVDT MTRMMAIELA
201: VYKIRVNSIA PGIFRSEITQ GLFQKEWLKK VTEKVVPLKM QQTVDPGLTS LVRYLIHDSS QYVTGNTYIV DSGTTLPGVP IFSSLSP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.