Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48725 | Canola | cytosol, peroxisome, plastid | 96.86 | 96.86 |
| AT1G62610.4 | Thale cress | cytosol, nucleus, peroxisome | 79.44 | 80.85 |
| AT1G63380.2 | Thale cress | cytosol | 79.44 | 79.44 |
| Bra014757.1-P | Field mustard | cytosol | 77.35 | 79.29 |
| Bra014762.1-P | Field mustard | cytosol | 77.0 | 78.93 |
| Bra040871.1-P | Field mustard | cytosol | 75.96 | 78.42 |
| Bra014761.1-P | Field mustard | cytosol | 67.94 | 76.77 |
| Bra002097.1-P | Field mustard | cytosol | 73.52 | 75.9 |
| Bra024488.1-P | Field mustard | plastid | 39.02 | 75.68 |
| Bra014760.1-P | Field mustard | plastid | 60.63 | 75.65 |
| PGSC0003DMT400030315 | Potato | nucleus, peroxisome, plastid | 63.07 | 66.79 |
| PGSC0003DMT400096536 | Potato | cytosol, nucleus, peroxisome | 52.61 | 65.65 |
| PGSC0003DMT400030316 | Potato | nucleus, peroxisome, plastid | 60.63 | 64.44 |
| PGSC0003DMT400092434 | Potato | cytosol, nucleus, peroxisome | 60.28 | 64.07 |
| PGSC0003DMT400088158 | Potato | cytosol | 57.14 | 63.81 |
| PGSC0003DMT400064364 | Potato | peroxisome, plastid, vacuole | 29.62 | 62.96 |
| Solyc12g100220.1.1 | Tomato | plastid | 59.23 | 62.73 |
| PGSC0003DMT400036566 | Potato | cytosol, extracellular, nucleus | 19.86 | 62.64 |
| KRH71621 | Soybean | cytosol | 61.32 | 62.41 |
| Solyc12g044940.1.1 | Tomato | nucleus | 58.54 | 61.99 |
| VIT_08s0040g01190.t01 | Wine grape | cytosol | 61.67 | 61.89 |
| PGSC0003DMT400061270 | Potato | cytosol, nucleus, peroxisome | 58.54 | 61.76 |
| Solyc10g080890.1.1 | Tomato | cytosol | 62.37 | 61.72 |
| PGSC0003DMT400083885 | Potato | nucleus, peroxisome, plastid | 58.19 | 61.62 |
| PGSC0003DMT400072205 | Potato | cytosol | 62.02 | 61.38 |
| Solyc12g045030.1.1 | Tomato | nucleus | 57.84 | 61.25 |
| VIT_08s0040g01200.t01 | Wine grape | cytosol | 60.98 | 61.19 |
| PGSC0003DMT400036569 | Potato | nucleus, peroxisome, plastid | 57.49 | 60.89 |
| Solyc10g006860.2.1 | Tomato | plastid | 57.49 | 59.78 |
| KRH71588 | Soybean | cytosol | 58.54 | 59.57 |
| PGSC0003DMT400062814 | Potato | cytosol | 20.56 | 59.0 |
| Solyc10g080900.1.1 | Tomato | plastid | 58.88 | 58.88 |
| Os08t0510400-01 | Rice | plastid | 57.14 | 57.75 |
| EES14264 | Sorghum | cytosol, plastid | 56.1 | 57.71 |
| Zm00001d031453_P001 | Maize | cytosol | 56.1 | 57.5 |
| TraesCS7D01G245700.1 | Wheat | cytosol | 56.45 | 57.24 |
| TraesCS7A01G246900.1 | Wheat | plastid | 56.1 | 56.89 |
| TraesCS7B01G144400.1 | Wheat | cytosol | 55.75 | 56.54 |
| TraesCS7A01G427800.1 | Wheat | mitochondrion | 54.01 | 55.56 |
| TraesCS2A01G528100.1 | Wheat | cytosol, peroxisome, plastid | 53.66 | 55.2 |
| TraesCS2D01G531000.1 | Wheat | plastid | 53.31 | 54.84 |
| HORVU7Hr1G050760.2 | Barley | vacuole | 57.14 | 52.56 |
| Bra007151.1-P | Field mustard | cytosol | 73.52 | 47.1 |
| Solyc12g036510.1.1 | Tomato | cytosol | 38.68 | 47.03 |
| HORVU2Hr1G116450.1 | Barley | plastid | 51.92 | 47.0 |
| KRH76339 | Soybean | cytosol | 18.47 | 46.9 |
| VIT_08s0040g01210.t01 | Wine grape | cytosol | 44.6 | 45.23 |
| Bra030964.1-P | Field mustard | cytosol | 26.13 | 28.52 |
Protein Annotations
| EnsemblPlants:Bra036706.1 | EnsemblPlants:Bra036706.1-P | EnsemblPlantsGene:Bra036706 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR44375 | PANTHER:PTHR44375:SF1 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 |
| ScanProsite:PS00061 | SUPFAM:SSF51735 | UniParc:UPI0002542039 | UniProt:M4F6J6 | MapMan:35.1 | : |
Description
AT3G55290 (E=3e-133) | short-chain dehydrogenase/reductase (SDR) family protein
Coordinates
chrA09:-:5519162..5520109
Molecular Weight (calculated)
31169.9 Da
IEP (calculated)
8.923
GRAVY (calculated)
0.050
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNPQTVRYI FTEVLTKLEP WRDLKDKVVL VTGASSGIGK EICLDLGKAG CKIIAAARRV DRLNSLCSDI NSFGSTGTQA TALEFDVASD AATIRKAVKE
101: AWEVFGKIDV LINNAGIRGN VKSSLDLSED EWDKVFRTNL TGPWLVSKYV CILMRDAKQG GSVINISSMA GVHRGMLPGA VAYACSKGGV DIMTRMMAIE
201: LGVYKIRVNS IAPGLFKSEI TQGLMQKEWL KKVNERTVPL KMQQTVDPGV TSLVRYLIHD SAEYVSGNTY IVDSGASLPG LPIFSSL
101: AWEVFGKIDV LINNAGIRGN VKSSLDLSED EWDKVFRTNL TGPWLVSKYV CILMRDAKQG GSVINISSMA GVHRGMLPGA VAYACSKGGV DIMTRMMAIE
201: LGVYKIRVNS IAPGLFKSEI TQGLMQKEWL KKVNERTVPL KMQQTVDPGV TSLVRYLIHD SAEYVSGNTY IVDSGASLPG LPIFSSL
001: MSNHQTQVLK LLEPWCELKD KVVLVTGASS GIGREICLDL AKAGCQVIAA ARRVDRLNSL CSEINSFSST GIQAAALELD VSSDAATIQK AVREAWDIFG
101: KIDALINNAG IRGNVKSSLD LSEDEWDNVF KTNLKGPWLV SKHVCMLMRD AKRGGSVINI SSIAGIRGML PGGLAYACSK GGVDTMSRMM ALELGVHKIR
201: VNSIAPGLFK SEITQGLMQK EWLKNVTERT VPLKVQQTVD PGLTSLVRYL IHDSSQYISG NTYIVDSGAT LPGVPIFSSL
101: KIDALINNAG IRGNVKSSLD LSEDEWDNVF KTNLKGPWLV SKHVCMLMRD AKRGGSVINI SSIAGIRGML PGGLAYACSK GGVDTMSRMM ALELGVHKIR
201: VNSIAPGLFK SEITQGLMQK EWLKNVTERT VPLKVQQTVD PGLTSLVRYL IHDSSQYISG NTYIVDSGAT LPGVPIFSSL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AL3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.