Factsheet for HORVU1Hr1G005260.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G035300.1	Wheat	cytosol	75.9	84.67
TraesCS1A01G034300.2	Wheat	cytosol	75.5	84.04
TraesCS1B01G050200.3	Wheat	cytosol	76.1	78.6
Os05t0112000-01	Rice	cytosol	69.72	77.78
EES18892	Sorghum	nucleus	67.33	72.69
Zm00001d035657_P001	Maize	cytosol	45.82	67.65
Zm00001d011060_P001	Maize	cytosol	59.36	66.82
HORVU4Hr1G059710.8	Barley	cytosol	54.78	57.89
HORVU3Hr1G116350.2	Barley	plastid	52.59	57.02
HORVU1Hr1G043970.3	Barley	plastid	23.71	42.05
HORVU7Hr1G029900.6	Barley	cytosol	23.31	24.58
HORVU1Hr1G048560.1	Barley	cytosol	24.5	23.65
HORVU7Hr1G011250.3	Barley	mitochondrion, nucleus	15.14	17.63

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	UniProt:A0A287EIQ7	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605
GO:GO:0009607	GO:GO:0009987	GO:GO:0016740	GO:GO:0019538	GO:GO:0042742	GO:GO:0051865
EnsemblPlantsGene:HORVU1Hr1G005260	EnsemblPlants:HORVU1Hr1G005260.1	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683
InterPro:IPR036770	PFAM:PF00023	PFAM:PF12796	PFAM:PF13857	PFscan:PS50088	PFscan:PS50089
PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF14	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850
UniParc:UPI000B47C8D6	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr1H:-:11498084..11501177

Molecular Weight (calculated)

53747.3 Da

IEP (calculated)

9.900

GRAVY (calculated)

-0.404

Length

502 amino acids

Sequence
(BLAST)

001: LSPFPTPQCP PHPPTSPAAG GALAGASPAA AASTFTAAGG GGGGGGRSRG RGHGARGELR AHRRRARLLP RGAARGPRRP GRAPRRRRLP RPPRHPLRPP
101: LPAPHRRRQR PAREALSMFL DRGALPDAVD RHKQTPLMLA AMHGKIGCVL KLLHAGANIL MFDSVHARTC LHHAAYYGHV DCLDAILSTA RTTPVADSWG
201: FARFVNVRDD HGATPLHLAA RQGRPGSVQL LLENGAIVSA LTGSYGFPGS TPLHLAARSG SLDCVRKLLA WGADRLQRDS AGRIAYVVAQ KRHHGACAAL
301: LNPSSAEPMV WPSPLKFISE LDPEAKALLE AALTEANRER EKKILKDAKC SPQSPLQYDD NIDDDMFSEV SDTELCCICF DQACTIEVED CGHQMCAPCT
401: LALCCHNKPN PATLTMPSPA CPFCRGSISR LVVAQTRADN ADPDRPASPQ LAHRRSRRSH NLSEGSSSFK GLSSAISKIT RGSSRMADSE SAAAMDKPEH
501: DL

Best Arabidopsis Sequence Match ( AT2G28840.1 )
(BLAST)

001: MGQSMSCGSR PEHGIFASVQ CGDIITIRRV MATEPSLLNQ TTPYDRHSVL HVAAANGQIE ILSLLLERFT NPDLLNRHKQ TPLMLAAMYG RISCVKKLAE
101: VGANILMFDS VNRRTCLHYA AYYGHANCVQ AILSAAQSSP VAVHWGYARF VNIRDDKGAT PLHLAARQRR PECVNVLLDS GSLVCASTSV YGSPGSTPLH
201: LAARSGSIDC VRKLLAWGAD RLQRDASGRI PYVVAMKHKH GACGALLNPS SAEPLVWPSP LKFISELNDE AKLLLEQALM EANREREKTI LKGTAYSLPS
301: PSFSDTDDNM SEVSDTELCC ICFEQVCTIE VKDCGHQMCA QCTLALCCHN KPNPTTSTVT PPVCPFCRST IACLVVAQNN NNNNEKSKSL DDVVVVDREA
401: GDVSSSKFRK HRRSINLGEE SSSFMGLSTI GSFGRITGRG SGRIAAENEL MDKPIL

Arabidopsis Description

XBAT31Putative E3 ubiquitin-protein ligase XBAT31 [Source:UniProtKB/Swiss-Prot;Acc:Q94B55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.