Factsheet for HORVU4Hr1G059710.8

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
endoplasmic reticulum 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G208300.1	Wheat	cytosol	91.79	96.46
TraesCS4B01G207400.1	Wheat	cytosol	90.53	96.2
TraesCS4A01G097000.2	Wheat	cytosol	90.95	95.15
EER92481	Sorghum	nucleus	82.11	87.05
Zm00001d028616_P001	Maize	cytosol	81.68	87.0
Zm00001d047806_P001	Maize	cytosol	81.47	86.77
Os03t0275300-01	Rice	nucleus	83.16	84.95
Zm00001d028254_P001	Maize	plastid	52.84	65.36
HORVU1Hr1G005260.1	Barley	plastid	57.89	54.78
HORVU3Hr1G116350.2	Barley	plastid	49.89	51.19
HORVU1Hr1G043970.3	Barley	plastid	24.42	40.99
HORVU1Hr1G048560.1	Barley	cytosol	29.26	26.73
HORVU7Hr1G029900.6	Barley	cytosol	26.32	26.26
HORVU7Hr1G011250.3	Barley	mitochondrion, nucleus	17.89	19.72

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU4Hr1G059710	EnsemblPlants:HORVU4Hr1G059710.8	InterPro:IPR001841
InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683	InterPro:IPR036770	UniProt:M0X3L1	PFAM:PF12796
PFAM:PF13857	PRINTS:PR01415	PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128
PANTHER:PTHR24128:SF19	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	UniParc:UPI0002956F67	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:499971348..499974421

Molecular Weight (calculated)

50738.5 Da

IEP (calculated)

7.862

GRAVY (calculated)

-0.180

Length

475 amino acids

Sequence
(BLAST)

001: MGHGASCGRP SEEVDFFGAA QSGDLARLAA AVSSRPSLLR RTTLFDRLSA LHIAAAHGHL QVVSMALDLC VQPDVVNRHK QVCHAPPVLF PVAPFVGSSS
101: SHRGTLPQTA LMLAAMHGRT ECVRRLLDAG ANILMFDSSH GRTCLHYAAY YGHSDCLRTI LTAARTAPVS QSWGYARFVN VRDDTGATPL HLAARQGWRR
201: CVHVLLENGA IVSASSGAFG FPGSTPLHLA ARGGSLDCVR QLLSWGADRL QRDSVGRIPY EVAVKRGHVA CAALLNPSSA EPLVWPAPLK FISELEPDAK
301: ALLEAALMEA NREREKRILK GAKNSLPSPS HSDDDAIVSE GAEVCSICFD QACAIEVREC GHQMCAACTL ALCCHAKPNP ATQSQPLPTC PFCRGGISRL
401: AVATRAKAGD EDEDDEEGEG RLESPRQRRS RRSVNLGDGG SSSSSLMGSI ASSIGKMGRR KTDSSELQVQ LEDKP

Best Arabidopsis Sequence Match ( AT2G28840.1 )
(BLAST)

001: MGQSMSCGSR PEHGIFASVQ CGDIITIRRV MATEPSLLNQ TTPYDRHSVL HVAAANGQIE ILSLLLERFT NPDLLNRHKQ TPLMLAAMYG RISCVKKLAE
101: VGANILMFDS VNRRTCLHYA AYYGHANCVQ AILSAAQSSP VAVHWGYARF VNIRDDKGAT PLHLAARQRR PECVNVLLDS GSLVCASTSV YGSPGSTPLH
201: LAARSGSIDC VRKLLAWGAD RLQRDASGRI PYVVAMKHKH GACGALLNPS SAEPLVWPSP LKFISELNDE AKLLLEQALM EANREREKTI LKGTAYSLPS
301: PSFSDTDDNM SEVSDTELCC ICFEQVCTIE VKDCGHQMCA QCTLALCCHN KPNPTTSTVT PPVCPFCRST IACLVVAQNN NNNNEKSKSL DDVVVVDREA
401: GDVSSSKFRK HRRSINLGEE SSSFMGLSTI GSFGRITGRG SGRIAAENEL MDKPIL

Arabidopsis Description

XBAT31Putative E3 ubiquitin-protein ligase XBAT31 [Source:UniProtKB/Swiss-Prot;Acc:Q94B55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.