Factsheet for Zm00001d028254_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025843_P001	Maize	plastid	52.6	98.06
Zm00001d028616_P001	Maize	cytosol	72.14	62.11
Zm00001d047806_P001	Maize	cytosol	70.83	60.99
TraesCS4B01G207400.1	Wheat	cytosol	65.89	56.6
TraesCS4D01G208300.1	Wheat	cytosol	66.15	56.19
TraesCS4A01G097000.2	Wheat	cytosol	65.62	55.51
Os03t0275300-01	Rice	nucleus	65.62	54.19
HORVU4Hr1G059710.8	Barley	cytosol	65.36	52.84
Zm00001d011060_P001	Maize	cytosol	51.04	43.95
Zm00001d041951_P001	Maize	cytosol	43.75	40.1
Zm00001d035657_P001	Maize	cytosol	27.86	31.47
Zm00001d045499_P001	Maize	cytosol	20.83	18.82
Zm00001d036014_P001	Maize	cytosol	19.53	18.34
Zm00001d029663_P001	Maize	cytosol	23.18	17.12
Zm00001d050184_P010	Maize	plasma membrane	21.09	15.43
Zm00001d052057_P013	Maize	cytosol, mitochondrion, nucleus, plasma membrane, plastid	20.05	13.87

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	UniProt:A0A1D6JTL6	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0016874	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683	InterPro:IPR036770
ProteinID:ONL95197.1	PFAM:PF00023	PFAM:PF12796	PFscan:PS50088	PFscan:PS50089	PFscan:PS50297
PANTHER:PTHR24128	PANTHER:PTHR24128:SF19	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	UniParc:UPI0008425124
EnsemblPlantsGene:Zm00001d028254	EnsemblPlants:Zm00001d028254_P001	EnsemblPlants:Zm00001d028254_T001	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

Putative E3 ubiquitin-protein ligase XBAT31

Coordinates

chr1:-:28055810..28058269

Molecular Weight (calculated)

41277.0 Da

IEP (calculated)

10.390

GRAVY (calculated)

-0.433

Length

384 amino acids

Sequence
(BLAST)

001: MTPPIPRTGG RACTTRRTTG TRTASGPSSR RRPSPRRSRN PGWPSSPRPS RRCSLAPLLM CSQLWRCRGF ARFVNVRDDT GATPLHLAAR QGWRRCVHVL
101: LENGAIVSAS SGAFGFSGST PLHLAARDGN LDCVRQLLSW GADRLQRDSV GRIPYEVAAK RGHVACAALL NPSSAEPLVW PSALKFISEL EPDAKSLLEA
201: ALMEANRERE RRTLKGAKNA LPSPSHPDDG AHGTAIAEAS DAEVCSICFE QACSIEVREC GHQMCAACTL ALCCHAKPNP ATQSQPLPTC PFCRGGIARL
301: VVATRTRAGD DEERGKLESP RHCQSRRSMS LSGDTPTRAA PAPSWAASPP PSARWATGEQ RAASRSTTTS RSKIIVSFHA SIHA

Best Arabidopsis Sequence Match ( AT2G28840.2 )
(BLAST)

001: MIVTLFFMSL LLMVRSRLVS VIFSEISPES RRNLVFLFLM YLLFLQILSL LLERFTNPDL LNRHKQTPLM LAAMYGRISC VKKLAEVGAN ILMFDSVNRR
101: TCLHYAAYYG HANCVQAILS AAQSSPVAVH WGYARFVNIR DDKGATPLHL AARQRRPECV NVLLDSGSLV CASTSVYGSP GSTPLHLAAR SGSIDCVRKL
201: LAWGADRLQR DASGRIPYVV AMKHKHGACG ALLNPSSAEP LVWPSPLKFI SELNDEAKLL LEQALMEANR EREKTILKGT AYSLPSPSFS DTDDNMSEVS
301: DTELCCICFE QVCTIEVKDC GHQMCAQCTL ALCCHNKPNP TTSTVTPPVC PFCRSTIACL VVAQNNNNNN EKSKSLDDVV VVDREAGDVS SSKFRKHRRS
401: INLGEESSSF MGLSTIGSFG RITGRGSGRI AAENELMDKP IL

Arabidopsis Description

XBAT31Putative E3 ubiquitin-protein ligase XBAT31 [Source:UniProtKB/Swiss-Prot;Acc:Q94B55]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.