Factsheet for Zm00001d028616_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047806_P001	Maize	cytosol	95.74	95.74
TraesCS4B01G207400.1	Wheat	cytosol	87.22	87.02
TraesCS4D01G208300.1	Wheat	cytosol	87.22	86.06
TraesCS4A01G097000.2	Wheat	cytosol	86.1	84.58
Os03t0275300-01	Rice	nucleus	87.89	84.3
HORVU4Hr1G059710.8	Barley	cytosol	87.0	81.68
Zm00001d025843_P001	Maize	plastid	34.53	74.76
Zm00001d028254_P001	Maize	plastid	62.11	72.14
Zm00001d011060_P001	Maize	cytosol	63.45	63.45
Zm00001d035657_P001	Maize	cytosol	45.74	60.0
Zm00001d041951_P001	Maize	cytosol	56.28	59.9
Zm00001d036014_P001	Maize	cytosol	26.68	29.1
Zm00001d045499_P001	Maize	cytosol	27.58	28.94
Zm00001d029663_P001	Maize	cytosol	29.6	25.38
Zm00001d050184_P010	Maize	plasma membrane	28.48	24.19
Zm00001d052057_P013	Maize	cytosol, mitochondrion, nucleus, plasma membrane, plastid	28.7	23.06

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:107305680	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EMBL:BT062697	UniProt:C0P328	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0016874	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683
InterPro:IPR036770	ProteinID:ONL96572.1	PFAM:PF12796	PRINTS:PR01415	PFscan:PS50088	PFscan:PS50089
PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF19	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850
UniParc:UPI0001948F7B	EnsemblPlantsGene:Zm00001d028616	EnsemblPlants:Zm00001d028616_P001	EnsemblPlants:Zm00001d028616_T001	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

Putative E3 ubiquitin-protein ligase XBAT31

Coordinates

chr1:-:40942152..40945320

Molecular Weight (calculated)

47703.9 Da

IEP (calculated)

8.051

GRAVY (calculated)

-0.167

Length

446 amino acids

Sequence
(BLAST)

001: MGHGASCGRP SEEVDFFGAA QSGDMARLAA ALRSRPTLLS RTTLFDRLSA LHIAAAHGHL QVVSLALDLC VHPDVVNRHK QTALMLSAMH GKTDCVRRLL
101: DAGANIVMFD SSHGRTCLHY AAYYGHADCL RTILSAAAKS APVSESWGFA RFVNVRDDTG ATPLHLAARQ GWRRCVHVLL ENGAIVSASS GAFGFPGSTP
201: LHLAARGGNL DCVRQLLSWG ADRLQRDSVG RIPYEVAAKR GHVACAALLN PSSAEPLVWP SALKFISELE PDAKSLLEAA LMEANRERER RILKGAKNAL
301: PSPSHPDDGA HDTAIAEASD AEVCSICFEQ ACSIEVRECG HQMCAACTLA LCCHAKPNPA TQSQPLPTCP FCRGGIARLV VATRTRAGDD EERCKLESPR
401: HCRARRSMSL SGDAGSTSTL MGSIASSIGK MGRRRTESSE QVDDKP

Best Arabidopsis Sequence Match ( AT2G28840.1 )
(BLAST)

001: MGQSMSCGSR PEHGIFASVQ CGDIITIRRV MATEPSLLNQ TTPYDRHSVL HVAAANGQIE ILSLLLERFT NPDLLNRHKQ TPLMLAAMYG RISCVKKLAE
101: VGANILMFDS VNRRTCLHYA AYYGHANCVQ AILSAAQSSP VAVHWGYARF VNIRDDKGAT PLHLAARQRR PECVNVLLDS GSLVCASTSV YGSPGSTPLH
201: LAARSGSIDC VRKLLAWGAD RLQRDASGRI PYVVAMKHKH GACGALLNPS SAEPLVWPSP LKFISELNDE AKLLLEQALM EANREREKTI LKGTAYSLPS
301: PSFSDTDDNM SEVSDTELCC ICFEQVCTIE VKDCGHQMCA QCTLALCCHN KPNPTTSTVT PPVCPFCRST IACLVVAQNN NNNNEKSKSL DDVVVVDREA
401: GDVSSSKFRK HRRSINLGEE SSSFMGLSTI GSFGRITGRG SGRIAAENEL MDKPIL

Arabidopsis Description

XBAT31Putative E3 ubiquitin-protein ligase XBAT31 [Source:UniProtKB/Swiss-Prot;Acc:Q94B55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.