Factsheet for Zm00001d050184_P010

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80200	Sorghum	nucleus	88.38	96.07
HORVU7Hr1G029900.6	Barley	cytosol	78.48	86.55
TraesCS7D01G147400.1	Wheat	cytosol	78.48	85.65
TraesCS7A01G145900.1	Wheat	cytosol	78.29	85.45
TraesCS7B01G048300.1	Wheat	cytosol	78.1	85.24
Os08t0258200-02	Rice	nucleus	77.9	82.63
GSMUA_Achr1P10240_001	Banana	nucleus	52.76	62.39
PGSC0003DMT400029191	Potato	cytosol, mitochondrion, nucleus, plastid	57.33	59.49
VIT_11s0037g01410.t01	Wine grape	cytosol, nucleus, plastid	56.76	58.55
Solyc07g006350.2.1	Tomato	cytosol, nucleus, plastid	56.57	57.78
KRH18952	Soybean	cytosol, nucleus, plastid	54.86	56.69
KRH02947	Soybean	cytosol, nucleus, plastid	54.29	55.88
Zm00001d052057_P013	Maize	cytosol, mitochondrion, nucleus, plasma membrane, plastid	56.38	53.33
CDY51284	Canola	cytosol	50.48	52.58
CDY02760	Canola	cytosol	50.48	52.37
Bra020414.1-P	Field mustard	plastid	49.9	51.88
Bra002699.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	50.48	51.46
AT5G57740.1	Thale cress	cytosol	49.52	51.18
VIT_18s0001g14720.t01	Wine grape	cytosol	8.19	47.78
CDY25888	Canola	extracellular, vacuole	41.33	47.07
Zm00001d036014_P001	Maize	cytosol	34.67	44.5
Zm00001d029663_P001	Maize	cytosol	43.05	43.46
Zm00001d045499_P001	Maize	cytosol	34.29	42.35
CDY65199	Canola	cytosol, mitochondrion, nucleus	14.1	34.42
Bra020415.1-P	Field mustard	mitochondrion	13.14	32.55
Zm00001d035657_P001	Maize	cytosol	19.24	29.71
Zm00001d047806_P001	Maize	cytosol	24.38	28.7
Zm00001d041951_P001	Maize	cytosol	22.86	28.64
Zm00001d028616_P001	Maize	cytosol	24.19	28.48
Zm00001d011060_P001	Maize	cytosol	23.24	27.35
Zm00001d028254_P001	Maize	plastid	15.43	21.09
Zm00001d025843_P001	Maize	plastid	7.43	18.93

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100285090	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	UniProt:A0A1D6Q098	ProteinID:AQK52075.1
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0016874	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683
InterPro:IPR036770	PFAM:PF00023	PFAM:PF12796	PRINTS:PR01415	ScanProsite:PS00518	PFscan:PS50088
PFscan:PS50089	PFscan:PS50297	PFscan:PS51257	PANTHER:PTHR24128	PANTHER:PTHR24128:SF22	SMART:SM00184
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0008424289
EnsemblPlantsGene:Zm00001d050184	EnsemblPlants:Zm00001d050184_P010	EnsemblPlants:Zm00001d050184_T010	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS
SEG:seg	:	:	:	:	:

Description

E3 ubiquitin-protein ligase XBAT32

Coordinates

chr4:+:71448751..71455940

Molecular Weight (calculated)

56228.3 Da

IEP (calculated)

8.752

GRAVY (calculated)

0.104

Length

525 amino acids

Sequence
(BLAST)

001: MSKGNVCTGA LRFFFPFAVP VFFFACPRSI CGLNAGAGPS IMGLLGMMGD SFGCSATGER LVSAARDGDI QEARALLELN PRLARYSTFG IRNSPLHYSA
101: AKGHHEIVSL LIESGVNINL RNCRGQTALM QACLYGHWKV VQILVLFKAN IHRRDCFSGA TAIHFAALKG HTRCIRLLVA DYVPSLSEFW TIMRGKSTDE
201: MKKGAFDAAS LQRLVNGKSD GGVTPLHLAA LHGHAESVQL LLDLGASVSE VTVNDGSTID LIGSGSTPLH YAACGGSAVC CQLLIAAGAN MGAQNVNGLT
301: PLLVARSWHK TSIEGILSKQ PENRMRILPS PYLCLPLMSI VKIARECGWR KTSASSTCQD PCVICLEVEC TVAAEGCGHE FCTKCALYLC STTSSSTSTR
401: GVPGSISCPL CRHAIVSFMR LTSTTPIKEL PWTSASLALC AAGSNTGRPE HGGSLHRRPD LRRLRSISVQ LGCSSFRSIG SGKLSSMKLN CTGAEEAVPC
501: LVSCLRPDVQ RSSSYRGRIR RYSEF

Best Arabidopsis Sequence Match ( AT5G07270.1 )
(BLAST)

001: MGNSFGCSAS GERLVSAARD GDFVEAKMLL DCNPCLAKYS TFGGLNSPLH FAAAKGHNEI VGLLLENGAD VNSRNYCGQT ALMQACRYGH WEVVQTLLLF
101: RCNVTRADYL AGRTALHFAA VNGHARCIRL VLADFLPSDK LNSLPETGVV TAKNKSEQSA LSKFVNKAAD GGITALHMAA LNGLFDCVQL LLDLEANVSA
201: VTFHYGTSMD MIGAGSTPLH YAACGGNLKC CQILLARGAR KMTLNCNGWL PIDIARMWSR HWLEPLLSPN SDVVIPAFPH SNYLSLPLLS ILNIAREFGL
301: QSATIGDEVD ICAVCLERTC TVAAEGCEHQ LCVRCALYLC SSSNVPSVTV GPPGSIPCPL CRHGITAFKR LPSSLTREMK LPMSLGFCAP CMLHTGDTTD
401: QSSPTCPPTE QRSSKTRAAS VSSDIFCPVT CSPFPSVNIP MCTCNEGTCP NFETHGTERH SEEHVESSPS RTTTEQEKIE EGQRLGKTTT CSSMFWGRRS
501: CSRENQCNSE INA

Arabidopsis Description

XBAT33XBAT33 [Source:UniProtKB/TrEMBL;Acc:A0A178U6J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.