Factsheet for HORVU7Hr1G029900.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G147400.1	Wheat	cytosol	96.22	95.22
TraesCS7B01G048300.1	Wheat	cytosol	95.59	94.59
TraesCS7A01G145900.1	Wheat	cytosol	94.96	93.97
OQU80200	Sorghum	nucleus	86.76	85.51
Os08t0258200-02	Rice	nucleus	83.61	80.4
Zm00001d050184_P010	Maize	plasma membrane	86.55	78.48
GSMUA_Achr1P10240_001	Banana	nucleus	58.19	62.39
PGSC0003DMT400029191	Potato	cytosol, mitochondrion, nucleus, plastid	63.45	59.68
VIT_11s0037g01410.t01	Wine grape	cytosol, nucleus, plastid	62.18	58.15
KRH18952	Soybean	cytosol, nucleus, plastid	61.55	57.68
Solyc07g006350.2.1	Tomato	cytosol, nucleus, plastid	61.97	57.39
KRH02947	Soybean	cytosol, nucleus, plastid	60.92	56.86
CDY51284	Canola	cytosol	55.46	52.38
CDY02760	Canola	cytosol	55.46	52.17
Bra020414.1-P	Field mustard	plastid	54.83	51.68
AT5G57740.1	Thale cress	cytosol	55.04	51.57
Bra002699.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	55.46	51.26
VIT_18s0001g14720.t01	Wine grape	cytosol	9.03	47.78
CDY25888	Canola	extracellular, vacuole	45.38	46.85
HORVU1Hr1G048560.1	Barley	cytosol	46.01	42.12
CDY65199	Canola	cytosol, mitochondrion, nucleus	15.97	35.35
Bra020415.1-P	Field mustard	mitochondrion	14.71	33.02
HORVU4Hr1G059710.8	Barley	cytosol	26.26	26.32
HORVU7Hr1G011250.3	Barley	mitochondrion, nucleus	23.32	25.75
HORVU1Hr1G005260.1	Barley	plastid	24.58	23.31
HORVU1Hr1G043970.3	Barley	plastid	13.24	22.26
HORVU3Hr1G116350.2	Barley	plastid	21.43	22.03

Protein Annotations

Gene3D:1.25.40.20	Gene3D:1.25.40.960	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	UniProt:A0A287VW19	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0006511	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009653	GO:GO:0009719	GO:GO:0009733	GO:GO:0009791
GO:GO:0009987	GO:GO:0010311	GO:GO:0010366	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0051865	EnsemblPlantsGene:HORVU7Hr1G029900	EnsemblPlants:HORVU7Hr1G029900.6	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083
InterPro:IPR020683	InterPro:IPR036770	PFAM:PF00023	PFAM:PF12796	PRINTS:PR01415	ScanProsite:PS00518
PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF22	SMART:SM00184
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	UniParc:UPI000B485483	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
InterPro:Znf_RING_CS	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:57341093..57346288

Molecular Weight (calculated)

51053.6 Da

IEP (calculated)

8.463

GRAVY (calculated)

0.038

Length

476 amino acids

Sequence
(BLAST)

001: MGLLGMMGDS FGCSATGERL VSAARDGDIQ EARALLELNP RLARYSTFGI RNTPLHYSAA KGHHEIVSLL IESGVDINLR NCRGQTALMQ ACLYGHWKVV
101: QILVLFKANI HKKDCFSGAT AIHFAALKGH TRCIRLILAD YVPSLSDFWN IMRGTSTEQA NKEAFDAANL QRLVNGKSDG GVTPLHLAAL HGHAESLQLL
201: LDLGASVSEV TVNDGSTIDL IGSGSTALHY AACGGSAVCC QLLIAAGAHM GAENANGLSP LMVARSWHKT SAEGILSKQP EGRLLILPSP YLSLPLMSIV
301: KIARECGWRK TSVSSSSCHD PCVICLEMEC TVAAEGCGHE FCTKCALYLC STTSSSTSTR GVPGSISCPL CRHTIVSFVK LRGTTSLKEL PWTTSSLALC
401: AAGASTGSLR RQSDIRRLRS SSVHLGCSSF RSIRSGKLNC GRLDETLPCL VNCIRPDVRR SSSYRERVGS RYSEFS

Best Arabidopsis Sequence Match ( AT5G57740.1 )
(BLAST)

001: MRFLSLVGNS FGCSASGERL VSAARDGDLQ EAKALLDYNP RLARYSTFGV RNSPLHYSAA QGHHEIVSLL VESGVDINLR NYRGQTALMQ ACQHGHWEVV
101: LILILFGANI HRSDYLNGGT ALHLAALNGH PRCIRILLSE YIPSVPNCWS LLKNKKTSVA GFDSSVLHEV INRAADGGIT PLHVAALNGH IETVQLLLDL
201: GASVTQVTVE DGTTIDLIGA GSTALHYASC GGNTQCCQLL ISKGACLAAV NSNGWTPMMV ARSWHRNWLE EILNPTTEQP QLHLPNVPSP FLCLPLMSIV
301: NIAQECGWRE NDCLTPCRDP CAVCLERKCT VAADGCAHEF CTNCALYLST TSITSSKTSN VTPGSVPCPL CRNGIVSFTK LPHTTATTRT STSSRTSISL
401: SFCTCSSDVL DTALLTNPHY SCKPVVSRTG SRTPQSARSS AFRSLSCRRF PPSLCLGGSD VDEPRSRLIG GSYSRSGVGF RRSTSQVEGK RSWFSALNHC
501: VTTGGSAC

Arabidopsis Description

XBAT32XBAT32 [Source:UniProtKB/TrEMBL;Acc:A0A178UH83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.