Factsheet for HORVU3Hr1G116350.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G304700.1	Wheat	cytosol	38.23	86.76
TraesCS3B01G609500.1	Wheat	cytosol	77.97	77.8
TraesCS3D01G537900.1	Wheat	cytosol	76.89	77.73
TraesCS3A01G532700.1	Wheat	cytosol	77.11	77.27
Zm00001d041951_P001	Maize	cytosol	51.84	57.28
Os01t0974400-01	Rice	cytosol	54.86	56.95
HORVU1Hr1G005260.1	Barley	plastid	57.02	52.59
EES02150	Sorghum	cytosol	54.21	51.86
HORVU4Hr1G059710.8	Barley	cytosol	51.19	49.89
HORVU1Hr1G043970.3	Barley	plastid	30.02	49.12
HORVU7Hr1G029900.6	Barley	cytosol	22.03	21.43
HORVU1Hr1G048560.1	Barley	cytosol	23.97	21.35
HORVU7Hr1G011250.3	Barley	mitochondrion, nucleus	16.2	17.4

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	UniProt:A0A287MTL4	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU3Hr1G116350
EnsemblPlants:HORVU3Hr1G116350.2	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683	InterPro:IPR036770
PFAM:PF00023	PFAM:PF12796	PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128
PANTHER:PTHR24128:SF20	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	UniParc:UPI000B47C793	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:695723314..695724794

Molecular Weight (calculated)

47891.1 Da

IEP (calculated)

7.954

GRAVY (calculated)

-0.258

Length

463 amino acids

Sequence
(BLAST)

001: WGTGSAAAAT ATSTTSSAPR RPATSTRSTA SSPPTRRSPA APRSTTASPR STSPPPTAAS RPSTCSSPAA SAPTLSTAAS APRSCSPPPT ATSTAPSPSS
101: APAPMSILMF DSVNARTCLH HAAYYGHADC LRAILAAART TPVADSWGFV RFVNVRDEHG ATPLHVAARQ GRPECVHLLL ESGAIVSAPT GSYGFPGSTA
201: LHLAARGGSL ECVRELLAWG ADRVHRDSAG RIAYSVATKR GHGACAALLN PSAAEPMVWP SPLKFIGELG ADARALLEAA LAEANREREK KILKGTNYTD
301: ASPALSDAGG DDDADDVDDQ EDEEVCSICF EQACSIEVED CGHRMCAACT LALCCHSKPN PATLTLQPPA CPFCRSCISR LVVADSKAKA VAVVCAGDEA
401: EEKQPASPRL SRRRSRRSRE GSSSFKGLSS AMGSLSSKIG RGSGRLAGDS DGVLLDKLEH HLP

Best Arabidopsis Sequence Match ( AT2G28840.1 )
(BLAST)

001: MGQSMSCGSR PEHGIFASVQ CGDIITIRRV MATEPSLLNQ TTPYDRHSVL HVAAANGQIE ILSLLLERFT NPDLLNRHKQ TPLMLAAMYG RISCVKKLAE
101: VGANILMFDS VNRRTCLHYA AYYGHANCVQ AILSAAQSSP VAVHWGYARF VNIRDDKGAT PLHLAARQRR PECVNVLLDS GSLVCASTSV YGSPGSTPLH
201: LAARSGSIDC VRKLLAWGAD RLQRDASGRI PYVVAMKHKH GACGALLNPS SAEPLVWPSP LKFISELNDE AKLLLEQALM EANREREKTI LKGTAYSLPS
301: PSFSDTDDNM SEVSDTELCC ICFEQVCTIE VKDCGHQMCA QCTLALCCHN KPNPTTSTVT PPVCPFCRST IACLVVAQNN NNNNEKSKSL DDVVVVDREA
401: GDVSSSKFRK HRRSINLGEE SSSFMGLSTI GSFGRITGRG SGRIAAENEL MDKPIL

Arabidopsis Description

XBAT31Putative E3 ubiquitin-protein ligase XBAT31 [Source:UniProtKB/Swiss-Prot;Acc:Q94B55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.