Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G532700.1 | Wheat | cytosol | 91.18 | 40.26 |
| TraesCS3D01G537900.1 | Wheat | cytosol | 89.71 | 39.96 |
| TraesCS3B01G609500.1 | Wheat | cytosol | 90.69 | 39.87 |
| HORVU3Hr1G116350.2 | Barley | plastid | 86.76 | 38.23 |
| TraesCS1D01G035300.1 | Wheat | cytosol | 58.33 | 26.44 |
| Os01t0974400-01 | Rice | cytosol | 54.9 | 25.11 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 53.43 | 24.77 |
| GSMUA_Achr7P18180_001 | Banana | cytosol | 50.98 | 23.58 |
| GSMUA_Achr10P... | Banana | nucleus | 50.49 | 23.52 |
| KRH10274 | Soybean | nucleus | 50.0 | 22.97 |
| CDY47891 | Canola | cytosol | 50.98 | 22.86 |
| CDY15789 | Canola | cytosol | 50.98 | 22.81 |
| Bra011923.1-P | Field mustard | nucleus | 50.98 | 22.76 |
| Zm00001d041951_P001 | Maize | cytosol | 46.57 | 22.67 |
| Solyc11g066020.1.1 | Tomato | nucleus | 49.51 | 22.65 |
| PGSC0003DMT400001171 | Potato | nucleus | 49.51 | 22.65 |
| KRH23057 | Soybean | nucleus | 50.0 | 22.62 |
| TraesCS4D01G208300.1 | Wheat | cytosol | 50.0 | 22.57 |
| AT2G28840.1 | Thale cress | cytosol | 50.0 | 22.37 |
| EES02150 | Sorghum | cytosol | 52.94 | 22.31 |
| Bra035664.1-P | Field mustard | nucleus | 49.02 | 22.17 |
| PGSC0003DMT400077953 | Potato | nucleus | 48.04 | 22.12 |
| CDX83303 | Canola | cytosol | 49.02 | 21.98 |
| Solyc06g076050.2.1 | Tomato | nucleus | 48.04 | 21.92 |
| VIT_08s0007g00200.t01 | Wine grape | nucleus | 47.55 | 21.85 |
| KRH46816 | Soybean | cytosol | 46.08 | 21.46 |
| CDX95759 | Canola | cytosol | 49.02 | 21.46 |
| KRG99867 | Soybean | nucleus | 46.08 | 21.32 |
| KRH29806 | Soybean | nucleus | 46.57 | 21.25 |
| CDX77214 | Canola | cytosol | 47.06 | 21.19 |
| GSMUA_Achr6P33430_001 | Banana | nucleus | 50.0 | 20.69 |
| KRH24806 | Soybean | nucleus | 45.1 | 20.58 |
| CDY31737 | Canola | cytosol | 48.04 | 20.55 |
| VIT_06s0004g04550.t01 | Wine grape | nucleus | 40.2 | 20.3 |
| Bra000480.1-P | Field mustard | plastid | 49.02 | 20.28 |
| Solyc09g010690.2.1 | Tomato | nucleus | 43.14 | 19.51 |
| PGSC0003DMT400023028 | Potato | nucleus | 43.14 | 16.96 |
| KRH46162 | Soybean | cytosol | 23.53 | 13.87 |
| TraesCS7D01G055500.1 | Wheat | cytosol | 17.16 | 7.95 |
| TraesCS7D01G147400.1 | Wheat | cytosol | 17.65 | 7.48 |
| TraesCS1D01G187300.1 | Wheat | cytosol | 18.14 | 7.12 |
| TraesCS6D01G335000.2 | Wheat | cytosol | 15.69 | 6.4 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G304700.1 | EnsemblPlantsGene:TraesCS7D01G304700 | PANTHER:PTHR24128 | PANTHER:PTHR24128:SF20 | SEG:seg | MapMan:35.1 |
Description
No Description!
Coordinates
chr7D:+:386560627..386562571
Molecular Weight (calculated)
21792.6 Da
IEP (calculated)
5.175
GRAVY (calculated)
-0.427
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MVWPSPLKFI SELGADARAL LEAALVEANR EREKKIVKGT KYSDSSPTLS DAGAGDDDDV DDQEDKEVCS ICFEQACSIE VEDRGNRMCA ACTLVLCCHS
101: KPNPATLQPP ACPFCRSCIS RLVVVDSKAK AVAVAGAGDE ADEKPASPRL SRRRSRTRSR EGSSNFKGLS SAMGSLSSKI ERGSGRLVGD GDGAFLDKLE
201: HDLP
101: KPNPATLQPP ACPFCRSCIS RLVVVDSKAK AVAVAGAGDE ADEKPASPRL SRRRSRTRSR EGSSNFKGLS SAMGSLSSKI ERGSGRLVGD GDGAFLDKLE
201: HDLP
001: MGQSMSCGSR PEHGIFASVQ CGDIITIRRV MATEPSLLNQ TTPYDRHSVL HVAAANGQIE ILSLLLERFT NPDLLNRHKQ TPLMLAAMYG RISCVKKLAE
101: VGANILMFDS VNRRTCLHYA AYYGHANCVQ AILSAAQSSP VAVHWGYARF VNIRDDKGAT PLHLAARQRR PECVNVLLDS GSLVCASTSV YGSPGSTPLH
201: LAARSGSIDC VRKLLAWGAD RLQRDASGRI PYVVAMKHKH GACGALLNPS SAEPLVWPSP LKFISELNDE AKLLLEQALM EANREREKTI LKGTAYSLPS
301: PSFSDTDDNM SEVSDTELCC ICFEQVCTIE VKDCGHQMCA QCTLALCCHN KPNPTTSTVT PPVCPFCRST IACLVVAQNN NNNNEKSKSL DDVVVVDREA
401: GDVSSSKFRK HRRSINLGEE SSSFMGLSTI GSFGRITGRG SGRIAAENEL MDKPIL
101: VGANILMFDS VNRRTCLHYA AYYGHANCVQ AILSAAQSSP VAVHWGYARF VNIRDDKGAT PLHLAARQRR PECVNVLLDS GSLVCASTSV YGSPGSTPLH
201: LAARSGSIDC VRKLLAWGAD RLQRDASGRI PYVVAMKHKH GACGALLNPS SAEPLVWPSP LKFISELNDE AKLLLEQALM EANREREKTI LKGTAYSLPS
301: PSFSDTDDNM SEVSDTELCC ICFEQVCTIE VKDCGHQMCA QCTLALCCHN KPNPTTSTVT PPVCPFCRST IACLVVAQNN NNNNEKSKSL DDVVVVDREA
401: GDVSSSKFRK HRRSINLGEE SSSFMGLSTI GSFGRITGRG SGRIAAENEL MDKPIL
Arabidopsis Description
XBAT31Putative E3 ubiquitin-protein ligase XBAT31 [Source:UniProtKB/Swiss-Prot;Acc:Q94B55]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.