CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05486
KXG26770
OQU92006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G28840.1	OQU92006	AT2G01950.1	19000166
AT2G28840.1	EES05486	AT4G21670.1	18541146
AT2G28840.1	KXG26770	AT4G21670.1	18541146

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041951_P001	Maize	cytosol	75.62	87.35
TraesCS3D01G537900.1	Wheat	cytosol	64.88	68.56
TraesCS3B01G609500.1	Wheat	cytosol	65.29	68.1
TraesCS3A01G532700.1	Wheat	cytosol	64.88	67.97
Os01t0974400-01	Rice	cytosol	61.78	67.04
EES18892	Sorghum	nucleus	64.05	66.67
VIT_06s0004g04550.t01	Wine grape	nucleus	53.93	64.6
GSMUA_Achr10P...	Banana	nucleus	55.58	61.42
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	55.58	61.14
GSMUA_Achr7P18180_001	Banana	cytosol	55.37	60.77
KRH29806	Soybean	nucleus	55.79	60.4
KRH10274	Soybean	nucleus	54.75	59.68
KRH24806	Soybean	nucleus	54.96	59.51
Solyc11g066020.1.1	Tomato	nucleus	54.75	59.42
PGSC0003DMT400001171	Potato	nucleus	54.75	59.42
KRH23057	Soybean	nucleus	55.17	59.2
EER92481	Sorghum	nucleus	54.55	58.93
PGSC0003DMT400077953	Potato	nucleus	53.51	58.47
VIT_08s0007g00200.t01	Wine grape	nucleus	52.69	57.43
Solyc06g076050.2.1	Tomato	nucleus	52.48	56.82
KRG99867	Soybean	nucleus	51.65	56.69
AT2G28840.1	Thale cress	cytosol	53.31	56.58
CDY15789	Canola	cytosol	53.1	56.36
CDY47891	Canola	cytosol	52.89	56.26
Bra011923.1-P	Field mustard	nucleus	52.89	56.02
KRH46816	Soybean	cytosol	50.62	55.94
CDX83303	Canola	cytosol	52.48	55.82
Bra035664.1-P	Field mustard	nucleus	51.03	54.77
CDX77214	Canola	cytosol	51.03	54.53
CDX95759	Canola	cytosol	52.48	54.51
Solyc09g010690.2.1	Tomato	nucleus	50.62	54.32
HORVU3Hr1G116350.2	Barley	plastid	51.86	54.21
TraesCS7D01G304700.1	Wheat	cytosol	22.31	52.94
GSMUA_Achr6P33430_001	Banana	nucleus	53.1	52.13
CDY31737	Canola	cytosol	51.03	51.78
Bra000480.1-P	Field mustard	plastid	51.03	50.1
PGSC0003DMT400023028	Potato	nucleus	50.41	47.01
KRH46162	Soybean	cytosol	32.85	45.95
KXG19180	Sorghum	cytosol	24.79	29.56
OQU80200	Sorghum	nucleus	25.41	25.47
EES05937	Sorghum	nucleus	25.83	25.15
EER92045	Sorghum	cytosol, nucleus, plastid	26.65	24.81

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	EntrezGene:8078061	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	UniProt:C5XJE9	EnsemblPlants:EES02150	ProteinID:EES02150	ProteinID:EES02150.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683
InterPro:IPR036770	PFAM:PF00023	PFAM:PF12796	PFscan:PS50088	PFscan:PS50089	PFscan:PS50297
PANTHER:PTHR24128	PANTHER:PTHR24128:SF20	SMART:SM00248	EnsemblPlantsGene:SORBI_3003G444900	SUPFAM:SSF48403	SUPFAM:SSF57850
unigene:Sbi.13035	UniParc:UPI0001A84D14	RefSeq:XP_002457030.1	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:74302872..74305149

Molecular Weight (calculated)

51267.0 Da

IEP (calculated)

7.207

GRAVY (calculated)

-0.104

Length

484 amino acids

Sequence
(BLAST)

001: MGHGLSCSRD GGEEHDLFRA VQLGDLDALL AADPELARHA TTIYDRLSLL HIAAANGQLQ VLSMLLDDDG AGGAHAPARP DVDVLNRKKQ TPLMLAAMHG
101: RTDCVLRLLE AGANILMFDS VHARTCLHHA AYYGHADCLQ AILSAAKASP VADSWGFARF VNVRDEHGAT PLHLAARQGR PQCVHHLLHA GAIVSAPTAS
201: YGFPGSTALH LAARRGNLDC VRELLAWGAD RLHRDSAGRI AYAVALRRSH RACAALLNPA AAEPMVWPSP LKLISELNPE AKALLEAALM EANREREKQI
301: IVNLKGGTTT KTKSSYSSSS AHDDDGTAVA SRSQLDDDDD ATELCGICLE QACSMEMQDC GHQMCAACTL ALCCHSKPNP TTLALQPPAC PFCRATITRL
401: LVANNKTSNS SDEAALGGGV RSHSHGSSSF RGLTSAIRSL SLSRIGRRGS GRVADSDGIC HGQASTPCGV NSLLPAQAII QSFF

Best Arabidopsis Sequence Match ( AT2G28840.1 )
(BLAST)

001: MGQSMSCGSR PEHGIFASVQ CGDIITIRRV MATEPSLLNQ TTPYDRHSVL HVAAANGQIE ILSLLLERFT NPDLLNRHKQ TPLMLAAMYG RISCVKKLAE
101: VGANILMFDS VNRRTCLHYA AYYGHANCVQ AILSAAQSSP VAVHWGYARF VNIRDDKGAT PLHLAARQRR PECVNVLLDS GSLVCASTSV YGSPGSTPLH
201: LAARSGSIDC VRKLLAWGAD RLQRDASGRI PYVVAMKHKH GACGALLNPS SAEPLVWPSP LKFISELNDE AKLLLEQALM EANREREKTI LKGTAYSLPS
301: PSFSDTDDNM SEVSDTELCC ICFEQVCTIE VKDCGHQMCA QCTLALCCHN KPNPTTSTVT PPVCPFCRST IACLVVAQNN NNNNEKSKSL DDVVVVDREA
401: GDVSSSKFRK HRRSINLGEE SSSFMGLSTI GSFGRITGRG SGRIAAENEL MDKPIL

Arabidopsis Description

XBAT31Putative E3 ubiquitin-protein ligase XBAT31 [Source:UniProtKB/Swiss-Prot;Acc:Q94B55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.