CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
golgi 1
endoplasmic reticulum 1
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46816	Soybean	cytosol	95.92	96.58
VIT_08s0007g00200.t01	Wine grape	nucleus	70.07	69.59
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	65.76	65.91
KRH23057	Soybean	nucleus	67.12	65.63
KRH10274	Soybean	nucleus	65.76	65.32
GSMUA_Achr7P18180_001	Banana	cytosol	64.4	64.4
KRH29806	Soybean	nucleus	65.08	64.21
GSMUA_Achr10P...	Banana	nucleus	63.27	63.7
KRH24806	Soybean	nucleus	64.4	63.53
Solyc09g010690.2.1	Tomato	nucleus	63.72	62.31
Os05t0112000-01	Rice	cytosol	61.9	60.67
TraesCS1A01G034300.2	Wheat	cytosol	61.22	59.87
TraesCS1D01G035300.1	Wheat	cytosol	61.0	59.78
EES18892	Sorghum	nucleus	62.59	59.35
TraesCS4B01G207400.1	Wheat	cytosol	59.41	58.61
TraesCS4D01G208300.1	Wheat	cytosol	59.18	57.74
TraesCS4A01G097000.2	Wheat	cytosol	58.73	57.05
KRH46162	Soybean	cytosol	44.67	56.94
EER92481	Sorghum	nucleus	57.82	56.92
Os03t0275300-01	Rice	nucleus	59.41	56.34
TraesCS1B01G050200.3	Wheat	cytosol	61.0	55.35
GSMUA_Achr6P33430_001	Banana	nucleus	60.77	54.36
Os01t0974400-01	Rice	cytosol	54.88	54.26
PGSC0003DMT400023028	Potato	nucleus	63.72	54.14
TraesCS3A01G532700.1	Wheat	cytosol	56.24	53.68
TraesCS3D01G537900.1	Wheat	cytosol	55.56	53.49
TraesCS3B01G609500.1	Wheat	cytosol	56.01	53.23
EES02150	Sorghum	cytosol	56.69	51.65
Zm00001d025843_P001	Maize	plastid	22.0	47.09
TraesCS7D01G304700.1	Wheat	cytosol	21.32	46.08
HORVU1Hr1G043970.3	Barley	plastid	24.26	37.81
KRH09105	Soybean	nucleus	28.34	24.46
KRH38558	Soybean	nucleus	28.12	24.27
KRG91461	Soybean	cytosol, nucleus, plastid	27.44	23.63
KRH35355	Soybean	nucleus	27.21	23.44
KRH18952	Soybean	cytosol, nucleus, plastid	26.98	23.43
KRH02947	Soybean	cytosol, nucleus, plastid	26.53	22.94

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100811410	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	EMBL:ACUP02011336	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_18G176600	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	UniProt:I1N2E2	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683
InterPro:IPR036770	EnsemblPlants:KRG99867	ProteinID:KRG99867	ProteinID:KRG99867.1	PFAM:PF12796	PFAM:PF13637
PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF14	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF57850	UniParc:UPI000233EE3E	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr18:+:42142819..42146472

Molecular Weight (calculated)

47785.6 Da

IEP (calculated)

7.127

GRAVY (calculated)

-0.113

Length

441 amino acids

Sequence
(BLAST)

001: MGQTLSCVQQ HEDHGVLFPA LASGELEVVE AMVEEDPTVL EHTIGCDRLS PLHVAAANGR IEVLSMLLDR SFNVDVLNRH KQTPLMLAVM HGKTGCVEKL
101: IHAGANILMF DSIRRRTCLH YAAYYGHIDC LKAILSAAHS TPVADSWGFA RFVNIRDGNG ATPLHLAARH RRSECLHALL DNGALVCAST GGYGYPGSTP
201: LHMAARGGSL DCVRMLLAWG ADRLQLDSSG KIPFSVALKH KHKACAALLD PSSAAPLVWP SPLKFISELN QEAKALLEKA LLEANREREK TILKETDMPP
301: SPLHSESEDD NIASEASDME LCCICFDQAC TIEVRPCGHQ MCAHCTLALC CHKKPDPATA GLSGPVCPFC RGTILQLLVA KINKISDTEV ESGPMKPRRS
401: RKSNFSEGSS SFKSLSAMGS FGRIAGRNSG KITDEKQWEV S

Best Arabidopsis Sequence Match ( AT2G28840.1 )
(BLAST)

001: MGQSMSCGSR PEHGIFASVQ CGDIITIRRV MATEPSLLNQ TTPYDRHSVL HVAAANGQIE ILSLLLERFT NPDLLNRHKQ TPLMLAAMYG RISCVKKLAE
101: VGANILMFDS VNRRTCLHYA AYYGHANCVQ AILSAAQSSP VAVHWGYARF VNIRDDKGAT PLHLAARQRR PECVNVLLDS GSLVCASTSV YGSPGSTPLH
201: LAARSGSIDC VRKLLAWGAD RLQRDASGRI PYVVAMKHKH GACGALLNPS SAEPLVWPSP LKFISELNDE AKLLLEQALM EANREREKTI LKGTAYSLPS
301: PSFSDTDDNM SEVSDTELCC ICFEQVCTIE VKDCGHQMCA QCTLALCCHN KPNPTTSTVT PPVCPFCRST IACLVVAQNN NNNNEKSKSL DDVVVVDREA
401: GDVSSSKFRK HRRSINLGEE SSSFMGLSTI GSFGRITGRG SGRIAAENEL MDKPIL

Arabidopsis Description

XBAT31Putative E3 ubiquitin-protein ligase XBAT31 [Source:UniProtKB/Swiss-Prot;Acc:Q94B55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.