Factsheet for Solyc09g010690.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
endoplasmic reticulum 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023028	Potato	nucleus	96.67	84.01
VIT_08s0007g00200.t01	Wine grape	nucleus	63.19	64.19
KRH46816	Soybean	cytosol	62.08	63.93
KRG99867	Soybean	nucleus	62.31	63.72
Solyc11g066020.1.1	Tomato	nucleus	60.98	61.66
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	59.65	61.14
Solyc06g076050.2.1	Tomato	nucleus	60.31	60.85
GSMUA_Achr7P18180_001	Banana	cytosol	59.2	60.54
Os05t0112000-01	Rice	cytosol	59.2	59.33
GSMUA_Achr10P...	Banana	nucleus	56.54	58.22
TraesCS1D01G035300.1	Wheat	cytosol	57.87	58.0
TraesCS4B01G207400.1	Wheat	cytosol	56.98	57.49
TraesCS1A01G034300.2	Wheat	cytosol	57.43	57.43
TraesCS4D01G208300.1	Wheat	cytosol	57.21	57.08
EES18892	Sorghum	nucleus	58.54	56.77
TraesCS4A01G097000.2	Wheat	cytosol	56.98	56.61
EER92481	Sorghum	nucleus	56.1	56.47
Os03t0275300-01	Rice	nucleus	55.88	54.19
TraesCS1B01G050200.3	Wheat	cytosol	57.65	53.5
GSMUA_Achr6P33430_001	Banana	nucleus	57.65	52.74
TraesCS3A01G532700.1	Wheat	cytosol	53.88	52.6
TraesCS3B01G609500.1	Wheat	cytosol	54.1	52.59
TraesCS3D01G537900.1	Wheat	cytosol	53.22	52.4
Os01t0974400-01	Rice	cytosol	51.44	52.02
EES02150	Sorghum	cytosol	54.32	50.62
KRH46162	Soybean	cytosol	38.58	50.29
Zm00001d025843_P001	Maize	plastid	21.73	47.57
TraesCS7D01G304700.1	Wheat	cytosol	19.51	43.14
HORVU1Hr1G043970.3	Barley	plastid	23.73	37.81
Solyc03g026060.2.1	Tomato	cytosol, nucleus, plastid	27.72	24.46
Solyc07g006350.2.1	Tomato	cytosol, nucleus, plastid	26.39	23.15

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
ncoils:Coil	UniProt:G8Z253	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EMBL:GQ261231
InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796
PFAM:PF13606	PFAM:PF13857	PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128
PANTHER:PTHR24128:SF14	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	EnsemblPlantsGene:Solyc09g010690.2	EnsemblPlants:Solyc09g010690.2.1
UniParc:UPI000243C62C	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

Hop-interacting protein THI015 [Source:UniProtKB/TrEMBL;Acc:G8Z253]

Coordinates

chr9:+:4016066..4020196

Molecular Weight (calculated)

48921.7 Da

IEP (calculated)

7.229

GRAVY (calculated)

-0.127

Length

451 amino acids

Sequence
(BLAST)

001: MGQKLSCGQQ SNEHGLFIAV QNGEVEKVEA MVDENPNVIR LKTLRGKLSA LHVAAVNGQI EVLCMLLDRG VNPDILNRHK QTPLMLAAMH GNVSCVERLI
101: QLGANILMFD SLHGRTCLHY AAYHGHSDCL QSILASAHSA PVAQSWGFAR FVNIRDGSGA TPLHLAARHG RPGCVRILLS NEALVCASSG GYGRPGSTPL
201: HLAAREGSLD CVRELLAWGA DRLYRDSSGR IPYIVALKNK HEACAALLNP SSPEPLTWPA PLKFITELDA EAKALLENAL IEANKDREKL ILEKTAVSQI
301: SLSHCDSGLE SDDFEASDFE LCCICFEQAC TIEIQKCGHQ MCAHCTLALC CHNKPNPASN SEKVPLCPFC RSDITHLVVV QNKIDTYEEV LSPSRPRKSR
401: TSFSHAEGDS SSSSSSNTSL KVLSPLTSFG KLGCRHSGKI SAERIEVFAK P

Best Arabidopsis Sequence Match ( AT2G28840.1 )
(BLAST)

001: MGQSMSCGSR PEHGIFASVQ CGDIITIRRV MATEPSLLNQ TTPYDRHSVL HVAAANGQIE ILSLLLERFT NPDLLNRHKQ TPLMLAAMYG RISCVKKLAE
101: VGANILMFDS VNRRTCLHYA AYYGHANCVQ AILSAAQSSP VAVHWGYARF VNIRDDKGAT PLHLAARQRR PECVNVLLDS GSLVCASTSV YGSPGSTPLH
201: LAARSGSIDC VRKLLAWGAD RLQRDASGRI PYVVAMKHKH GACGALLNPS SAEPLVWPSP LKFISELNDE AKLLLEQALM EANREREKTI LKGTAYSLPS
301: PSFSDTDDNM SEVSDTELCC ICFEQVCTIE VKDCGHQMCA QCTLALCCHN KPNPTTSTVT PPVCPFCRST IACLVVAQNN NNNNEKSKSL DDVVVVDREA
401: GDVSSSKFRK HRRSINLGEE SSSFMGLSTI GSFGRITGRG SGRIAAENEL MDKPIL

Arabidopsis Description

XBAT31Putative E3 ubiquitin-protein ligase XBAT31 [Source:UniProtKB/Swiss-Prot;Acc:Q94B55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.