CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99867	Soybean	nucleus	56.94	44.67
KRH46816	Soybean	cytosol	56.07	44.29
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	52.89	41.59
GSMUA_Achr10P...	Banana	nucleus	50.58	39.95
VIT_08s0007g00200.t01	Wine grape	nucleus	50.87	39.64
KRH23057	Soybean	nucleus	51.45	39.47
KRH10274	Soybean	nucleus	50.58	39.41
Os05t0112000-01	Rice	cytosol	51.16	39.33
GSMUA_Achr7P18180_001	Banana	cytosol	49.71	39.0
TraesCS4B01G207400.1	Wheat	cytosol	50.0	38.7
Solyc09g010690.2.1	Tomato	nucleus	50.29	38.58
TraesCS1A01G034300.2	Wheat	cytosol	50.0	38.36
KRH24806	Soybean	nucleus	49.42	38.26
KRH29806	Soybean	nucleus	49.42	38.26
TraesCS1D01G035300.1	Wheat	cytosol	49.71	38.22
EES18892	Sorghum	nucleus	51.16	38.06
TraesCS4D01G208300.1	Wheat	cytosol	49.42	37.83
TraesCS4A01G097000.2	Wheat	cytosol	49.42	37.67
Os03t0275300-01	Rice	nucleus	49.71	36.99
EER92481	Sorghum	nucleus	47.4	36.61
TraesCS1B01G050200.3	Wheat	cytosol	49.71	35.39
Os01t0974400-01	Rice	cytosol	44.51	34.53
TraesCS3A01G532700.1	Wheat	cytosol	45.66	34.2
TraesCS3D01G537900.1	Wheat	cytosol	45.09	34.06
GSMUA_Achr6P33430_001	Banana	nucleus	47.98	33.67
TraesCS3B01G609500.1	Wheat	cytosol	45.09	33.62
PGSC0003DMT400023028	Potato	nucleus	50.29	33.53
EES02150	Sorghum	cytosol	45.95	32.85
Zm00001d025843_P001	Maize	plastid	18.79	31.55
HORVU1Hr1G043970.3	Barley	plastid	23.99	29.33
TraesCS7D01G304700.1	Wheat	cytosol	13.87	23.53
KRH09105	Soybean	nucleus	30.06	20.35
KRH38558	Soybean	nucleus	29.77	20.16
KRH35355	Soybean	nucleus	29.48	19.92
KRG91461	Soybean	cytosol, nucleus, plastid	29.48	19.92
KRH18952	Soybean	cytosol, nucleus, plastid	27.17	18.5
KRH02947	Soybean	cytosol, nucleus, plastid	27.17	18.43

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100795210	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	EMBL:ACUP02005326	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_08G315500	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683	InterPro:IPR036770
UniProt:K7LA40	EnsemblPlants:KRH46162	ProteinID:KRH46162	ProteinID:KRH46162.1	PFAM:PF12796	ScanProsite:PS00518
PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF14	SMART:SM00184
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	UniParc:UPI0002962D00	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
InterPro:Znf_RING_CS	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:43550857..43555532

Molecular Weight (calculated)

38053.0 Da

IEP (calculated)

8.316

GRAVY (calculated)

-0.219

Length

346 amino acids

Sequence
(BLAST)

001: MVEEDPNVLK LTTDDDQKLS PLHVAAATGQ VKVLSMLLDR NMNVDIVNHN NQTPLMYAAK QGKIDCVKKL IQAGANVFMI DSVHGGGCLH DAASHGHVDC
101: LKAILFAAHF TAFEDSRGYL RFVDSRDFNG FAPLHLAALK GQSECVDALL DNDAILCART SNCGGTALHL AARSGSLDCI RILLARGADR LQFDYHGNTP
201: YTIALEHGHE ECAALLGSTS GSSLVWPNHL RFIRELDKKT KALLEKALVE LNKERQKAKN KPRSSRNLER NNNNIASMAG KKELCSICYD RVCTFVVRPC
301: GHEMCAHCIM RLCQKKSDID APRSSNSKPV CPFCRGDIVR LLAKTK

Best Arabidopsis Sequence Match ( AT3G04710.1 )
(BLAST)

001: MAPDASTALA AREKVQQILN AACTGNLEFL KNVAKQLDEG KDLTKTVESI KDANKRGALH FAAREGQTEI CRYLLEELKL NADAKDETGD TPLVHAARQG
101: QIETVKYLLE QGADPNIASE LGATALHHAA GTGEIELLKE LLSRGVPVDS ESESGTPLIW AAGHDQKNAV EVLLEHNANP NAETEDNITP LLSAVAAGSL
201: SCLELLVKAG AKANVFAGGA TPLHIAADIG NLELINCLLK AGADPNQKDE EGNRPLEVAA ARDNRKVVEI LFPLTTKPET VSDWTVDGIL AHMESNKEQE
301: ENSNKAKSQE TGIKKDLPVV SPEAKAKAAE AKARGQDAFH RKDFQMAIDA YTQAIDFDPT DHTLFSNRSL CWLRLGQAEH ALSDAKACRE LNPDWPKGCF
401: REGAALRLLQ RFDEAANAFY EGVLLSPESK ELIDAFREAV DAGRKFHGKG EVKAKS

Arabidopsis Description

TPR10Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4J4V1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.