CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
endoplasmic reticulum 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09105	Soybean	nucleus	94.52	94.52
KRH35355	Soybean	nucleus	85.52	85.35
KRG91461	Soybean	cytosol, nucleus, plastid	85.32	85.16
VIT_16s0100g00690.t01	Wine grape	nucleus	84.34	84.18
PGSC0003DMT400037056	Potato	cytosol, nucleus, plastid	80.82	80.82
Solyc03g026060.2.1	Tomato	cytosol, nucleus, plastid	80.23	80.23
GSMUA_Achr11P...	Banana	plastid	39.14	74.91
Bra009278.1-P	Field mustard	cytosol	75.15	74.56
CDX70022	Canola	cytosol	75.15	74.56
CDX98991	Canola	cytosol	74.56	74.12
CDY66355	Canola	cytosol	74.17	73.88
AT5G07270.1	Thale cress	cytosol	73.78	73.49
GSMUA_Achr11P...	Banana	cytosol	68.69	68.16
Os10t0521600-01	Rice	cytosol	32.09	67.77
TraesCS1B01G196800.1	Wheat	cytosol	64.77	63.65
TraesCS1D01G187300.1	Wheat	cytosol	64.58	63.46
TraesCS1A01G189100.1	Wheat	cytosol	64.58	63.46
HORVU1Hr1G048560.1	Barley	cytosol	64.38	63.27
EER92045	Sorghum	cytosol, nucleus, plastid	63.41	62.31
Zm00001d029663_P001	Maize	cytosol	63.01	61.92
GSMUA_Achr11P...	Banana	mitochondrion	32.68	57.59
KRH18952	Soybean	cytosol, nucleus, plastid	51.08	51.38
KRH02947	Soybean	cytosol, nucleus, plastid	50.68	50.78
KRH46162	Soybean	cytosol	20.16	29.77
KRH10274	Soybean	nucleus	25.64	29.5
KRH23057	Soybean	nucleus	25.83	29.27
KRH29806	Soybean	nucleus	25.24	28.86
KRH24806	Soybean	nucleus	25.05	28.64
KRG99867	Soybean	nucleus	24.27	28.12
KRH46816	Soybean	cytosol	24.07	28.08

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100784143	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	EMBL:ACUP02005849	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:GLYMA_09G143600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
UniProt:I1L3B1	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683	InterPro:IPR036770
EnsemblPlants:KRH38558	ProteinID:KRH38558	ProteinID:KRH38558.1	PFAM:PF12796	PFAM:PF13857	PRINTS:PR01415
ScanProsite:PS00518	PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF35
SMART:SM00184	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	UniParc:UPI0002338772	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:35657078..35663499

Molecular Weight (calculated)

54915.0 Da

IEP (calculated)

7.120

GRAVY (calculated)

-0.022

Length

511 amino acids

Sequence
(BLAST)

001: MGNSFGCSAS GERLVSAARD GDLVEAKMLL ECNPCLAKYS TFGGLNSPLH FAASKGHNEI VALLLENGAD VNSRNYCGQT ALMQACRYGH WEVVQTLLLF
101: KCNVMKADYL SGRTALHFAA INGHARCIRL VVADFVPSAP FEALHAHMVA EGDASNVKNK YEQSALSKFI NKTADAGITA LHMAALNGYF DCVQLLLDLS
201: ANVSAATFHY GTSMDLIGAG STPLHYAACG GNLKCCQILL ARGASRMALN CNGWLPLDVA RMWGRHWLEP LLTPTSDATI SSFPSSNYLS LPLMSVLNIA
301: RECGLQSTTT SSNEVDACAV CLERQCSVAA EGCGHELCVR CALYLCSTSN VSSETGGPPG SIPCPLCRHG IVSFVKLSGS KAKENKLHVS LSLCTPCMLH
401: PRDLDRPSLS LTPEIRRNRV ASVPSEMLCP VTCTPFPSVA IPLCTCNDGP CPSFEPREAE AQDGSPRHSQ AAMMDQNKMD GPRLEKMTCS GMFWGRRSCS
501: REHQCNSEIN A

Best Arabidopsis Sequence Match ( AT5G07270.1 )
(BLAST)

001: MGNSFGCSAS GERLVSAARD GDFVEAKMLL DCNPCLAKYS TFGGLNSPLH FAAAKGHNEI VGLLLENGAD VNSRNYCGQT ALMQACRYGH WEVVQTLLLF
101: RCNVTRADYL AGRTALHFAA VNGHARCIRL VLADFLPSDK LNSLPETGVV TAKNKSEQSA LSKFVNKAAD GGITALHMAA LNGLFDCVQL LLDLEANVSA
201: VTFHYGTSMD MIGAGSTPLH YAACGGNLKC CQILLARGAR KMTLNCNGWL PIDIARMWSR HWLEPLLSPN SDVVIPAFPH SNYLSLPLLS ILNIAREFGL
301: QSATIGDEVD ICAVCLERTC TVAAEGCEHQ LCVRCALYLC SSSNVPSVTV GPPGSIPCPL CRHGITAFKR LPSSLTREMK LPMSLGFCAP CMLHTGDTTD
401: QSSPTCPPTE QRSSKTRAAS VSSDIFCPVT CSPFPSVNIP MCTCNEGTCP NFETHGTERH SEEHVESSPS RTTTEQEKIE EGQRLGKTTT CSSMFWGRRS
501: CSRENQCNSE INA

Arabidopsis Description

XBAT33XBAT33 [Source:UniProtKB/TrEMBL;Acc:A0A178U6J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.