Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66355 | Canola | cytosol | 92.01 | 92.01 |
| Bra009278.1-P | Field mustard | cytosol | 92.2 | 91.84 |
| CDX70022 | Canola | cytosol | 92.2 | 91.84 |
| CDX98991 | Canola | cytosol | 91.62 | 91.44 |
| VIT_16s0100g00690.t01 | Wine grape | nucleus | 76.61 | 76.76 |
| Solyc03g026060.2.1 | Tomato | cytosol, nucleus, plastid | 74.85 | 75.15 |
| PGSC0003DMT400037056 | Potato | cytosol, nucleus, plastid | 74.66 | 74.95 |
| KRH09105 | Soybean | nucleus | 74.46 | 74.76 |
| KRH35355 | Soybean | nucleus | 73.68 | 73.83 |
| KRH38558 | Soybean | nucleus | 73.49 | 73.78 |
| KRG91461 | Soybean | cytosol, nucleus, plastid | 73.49 | 73.63 |
| GSMUA_Achr11P... | Banana | plastid | 38.01 | 73.03 |
| Os10t0521600-01 | Rice | cytosol | 31.58 | 66.94 |
| GSMUA_Achr11P... | Banana | cytosol | 62.77 | 62.52 |
| TraesCS1D01G187300.1 | Wheat | cytosol | 62.57 | 61.73 |
| TraesCS1A01G189100.1 | Wheat | cytosol | 62.57 | 61.73 |
| TraesCS1B01G196800.1 | Wheat | cytosol | 62.38 | 61.54 |
| HORVU1Hr1G048560.1 | Barley | cytosol | 62.38 | 61.54 |
| EER92045 | Sorghum | cytosol, nucleus, plastid | 60.23 | 59.42 |
| Zm00001d029663_P001 | Maize | cytosol | 59.45 | 58.65 |
| GSMUA_Achr11P... | Banana | mitochondrion | 29.24 | 51.72 |
| AT5G57740.1 | Thale cress | cytosol | 46.39 | 46.85 |
| AT2G28840.1 | Thale cress | cytosol | 25.34 | 28.51 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:19.2.2.1.5.3.2 | Gene3D:3.30.40.10 | EntrezGene:830618 | UniProt:A0A178U6J8 | ProteinID:AED91131.1 |
| ArrayExpress:AT5G07270 | EnsemblPlantsGene:AT5G07270 | RefSeq:AT5G07270 | TAIR:AT5G07270 | RefSeq:AT5G07270-TAIR-G | EnsemblPlants:AT5G07270.1 |
| TAIR:AT5G07270.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | Unigene:At.43358 | EMBL:BT029297 |
| ProteinID:CAB87283.1 | EMBL:DQ086846 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR001841 | InterPro:IPR002110 | InterPro:IPR013083 |
| InterPro:IPR020683 | InterPro:IPR036770 | RefSeq:NP_196344.2 | ProteinID:OAO89556.1 | PFAM:PF00023 | PFAM:PF12796 |
| PFAM:PF13857 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00518 | PFscan:PS50088 |
| PFscan:PS50089 | PFscan:PS50297 | PANTHER:PTHR24128 | PANTHER:PTHR24128:SF35 | UniProt:Q4FE45 | SMART:SM00248 |
| SUPFAM:SSF48403 | SUPFAM:SSF57850 | UniParc:UPI000034F2B6 | Symbol:XBAT33 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_RING_CS | : | : | : | : | : |
Description
XBAT33XBAT33 [Source:UniProtKB/TrEMBL;Acc:A0A178U6J8]
Coordinates
chr5:+:2280560..2283667
Molecular Weight (calculated)
55350.3 Da
IEP (calculated)
6.880
GRAVY (calculated)
-0.058
Length
513 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNSFGCSAS GERLVSAARD GDFVEAKMLL DCNPCLAKYS TFGGLNSPLH FAAAKGHNEI VGLLLENGAD VNSRNYCGQT ALMQACRYGH WEVVQTLLLF
101: RCNVTRADYL AGRTALHFAA VNGHARCIRL VLADFLPSDK LNSLPETGVV TAKNKSEQSA LSKFVNKAAD GGITALHMAA LNGLFDCVQL LLDLEANVSA
201: VTFHYGTSMD MIGAGSTPLH YAACGGNLKC CQILLARGAR KMTLNCNGWL PIDIARMWSR HWLEPLLSPN SDVVIPAFPH SNYLSLPLLS ILNIAREFGL
301: QSATIGDEVD ICAVCLERTC TVAAEGCEHQ LCVRCALYLC SSSNVPSVTV GPPGSIPCPL CRHGITAFKR LPSSLTREMK LPMSLGFCAP CMLHTGDTTD
401: QSSPTCPPTE QRSSKTRAAS VSSDIFCPVT CSPFPSVNIP MCTCNEGTCP NFETHGTERH SEEHVESSPS RTTTEQEKIE EGQRLGKTTT CSSMFWGRRS
501: CSRENQCNSE INA
101: RCNVTRADYL AGRTALHFAA VNGHARCIRL VLADFLPSDK LNSLPETGVV TAKNKSEQSA LSKFVNKAAD GGITALHMAA LNGLFDCVQL LLDLEANVSA
201: VTFHYGTSMD MIGAGSTPLH YAACGGNLKC CQILLARGAR KMTLNCNGWL PIDIARMWSR HWLEPLLSPN SDVVIPAFPH SNYLSLPLLS ILNIAREFGL
301: QSATIGDEVD ICAVCLERTC TVAAEGCEHQ LCVRCALYLC SSSNVPSVTV GPPGSIPCPL CRHGITAFKR LPSSLTREMK LPMSLGFCAP CMLHTGDTTD
401: QSSPTCPPTE QRSSKTRAAS VSSDIFCPVT CSPFPSVNIP MCTCNEGTCP NFETHGTERH SEEHVESSPS RTTTEQEKIE EGQRLGKTTT CSSMFWGRRS
501: CSRENQCNSE INA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.