Factsheet for GSMUA_Achr11P17430_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 2
endoplasmic reticulum 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0521600-01	Rice	cytosol	62.17	68.59
GSMUA_Achr11P...	Banana	cytosol	81.65	42.33
VIT_16s0100g00690.t01	Wine grape	nucleus	78.65	41.02
CDY27425	Canola	cytosol	12.73	40.48
PGSC0003DMT400037056	Potato	cytosol, nucleus, plastid	76.78	40.12
Solyc03g026060.2.1	Tomato	cytosol, nucleus, plastid	76.4	39.92
KRG91461	Soybean	cytosol, nucleus, plastid	76.4	39.84
KRH35355	Soybean	nucleus	76.03	39.65
KRH38558	Soybean	nucleus	74.91	39.14
KRH09105	Soybean	nucleus	74.16	38.75
CDY66355	Canola	cytosol	73.03	38.01
AT5G07270.1	Thale cress	cytosol	73.03	38.01
CDX98991	Canola	cytosol	73.03	37.94
Bra009278.1-P	Field mustard	cytosol	73.03	37.86
CDX70022	Canola	cytosol	73.03	37.86
TraesCS1A01G189100.1	Wheat	cytosol	70.79	36.35
TraesCS1B01G196800.1	Wheat	cytosol	70.79	36.35
TraesCS1D01G187300.1	Wheat	cytosol	70.79	36.35
HORVU1Hr1G048560.1	Barley	cytosol	70.41	36.15
EER92045	Sorghum	cytosol, nucleus, plastid	69.29	35.58
Zm00001d029663_P001	Maize	cytosol	68.91	35.38
GSMUA_Achr1P10240_001	Banana	nucleus	56.18	33.78
GSMUA_Achr1P07900_001	Banana	cytosol, nucleus, plastid	56.55	33.04
GSMUA_Achr4P02080_001	Banana	nucleus	60.67	32.27
GSMUA_Achr3P04900_001	Banana	nucleus	57.3	31.94
GSMUA_Achr7P18180_001	Banana	cytosol	32.96	19.95
GSMUA_Achr10P...	Banana	nucleus	31.84	19.41
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	31.84	19.32
GSMUA_Achr6P33430_001	Banana	nucleus	29.59	16.02
GSMUA_Achr11P...	Banana	mitochondrion	3.75	3.45

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr11G17430_001	EnsemblPlants:GSMUA_Achr11P17430_001	EnsemblPlants:GSMUA_Achr11T17430_001	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	UniProt:M0RT23	PFAM:PF00023	PFAM:PF13637	PRINTS:PR01415
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF35	SMART:SM00248	SUPFAM:SSF48403
UniParc:UPI0002961F90	SEG:seg	:	:	:	:

Description

E3 ubiquitin-protein ligase XBAT33 [Source:GMGC_GENE;Acc:GSMUA_Achr11G17430_001]

Coordinates

chr11:+:19008983..19010327

Molecular Weight (calculated)

28777.6 Da

IEP (calculated)

7.449

GRAVY (calculated)

0.199

Length

267 amino acids

Sequence
(BLAST)

001: MGNSLGCSAS GERLVSAARD GDLVEARMLL EFNPSLAKYS TFRGLNSPLH FAAAKGHNEI VTLLLENGAD VNLRNYCGQT ALMQACRYGH WEVVQTLLIF
101: RSVVTRVDYL SGRTALHFAA VGGHVRCIRL LVADFIPSAP YEVIGGAGSE SSSDSSLDRK HDHALTKFIN KPADGGITAL HMAALNGYFD CVQLLLDLGA
201: NVSAVTFQYG TSANLIGAGS TPLHYAACGG NLKCCQAILT LSCPYYTPWM CAYGYFSYVV RIYQLLT

Best Arabidopsis Sequence Match ( AT4G19150.1 )
(BLAST)

001: MAGRSGGGRG GGGGGASADL HSAARSGDLA AVQSIISSNP LAVNSRDKHS RTPLHLAAWA GHNEVVSYLC KNKADVGAAA GDDMGAIHFA SQKGHLEVVR
101: TLLSAGGSVK SITRKGLTPL HYAAQGSHFE IVKYLVKKGA SVRATTKAGK SPADVAGNAE TQNFLEECEE QARKAKVNNE KKTEIVKPES CSNEGDVKDL
201: KRKDSEDGNE GEEEEASSKP KKPKVALSHL QDIDDTEADQ EEE

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GX17]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.