Factsheet for GSMUA_Achr11P17440_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
extracellular 1
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	67.93	38.25
VIT_16s0100g00690.t01	Wine grape	nucleus	61.72	34.96
HORVU1Hr1G048560.1	Barley	cytosol	59.31	33.08
PGSC0003DMT400037056	Potato	cytosol, nucleus, plastid	58.28	33.07
Solyc03g026060.2.1	Tomato	cytosol, nucleus, plastid	58.28	33.07
TraesCS1D01G187300.1	Wheat	cytosol	58.97	32.88
EER92045	Sorghum	cytosol, nucleus, plastid	58.97	32.88
TraesCS1B01G196800.1	Wheat	cytosol	58.97	32.88
TraesCS1A01G189100.1	Wheat	cytosol	58.62	32.69
Zm00001d029663_P001	Maize	cytosol	58.62	32.69
KRH38558	Soybean	nucleus	57.59	32.68
KRH09105	Soybean	nucleus	57.24	32.49
KRH35355	Soybean	nucleus	57.24	32.42
KRG91461	Soybean	cytosol, nucleus, plastid	57.24	32.42
AT5G07270.1	Thale cress	cytosol	51.72	29.24
CDX98991	Canola	cytosol	51.72	29.18
Bra009278.1-P	Field mustard	cytosol	51.38	28.93
CDX70022	Canola	cytosol	51.38	28.93
CDY66355	Canola	cytosol	51.03	28.85
GSMUA_Achr1P07900_001	Banana	cytosol, nucleus, plastid	34.48	21.88
GSMUA_Achr3P04900_001	Banana	nucleus	33.79	20.46
GSMUA_Achr4P02080_001	Banana	nucleus	35.17	20.32
GSMUA_Achr1P10240_001	Banana	nucleus	29.31	19.14
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	21.03	13.86
GSMUA_Achr7P18180_001	Banana	cytosol	19.66	12.93
GSMUA_Achr10P...	Banana	nucleus	19.31	12.79
GSMUA_Achr6P33430_001	Banana	nucleus	19.31	11.36
CDY27425	Canola	cytosol	1.38	4.76
GSMUA_Achr11P...	Banana	plastid	3.45	3.75
Os10t0521600-01	Rice	cytosol	2.76	3.31

Protein Annotations

EnsemblPlants:GSMUA_Achr11P17440_001	EnsemblPlants:GSMUA_Achr11T17440_001	EnsemblPlantsGene:GSMUA_Achr11G17440_001	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	PANTHER:PTHR24128	PANTHER:PTHR24128:SF35	PFscan:PS50089
ScanProsite:PS00518	SEG:seg	SUPFAM:SSF57850	UniParc:UPI000295101F	UniProt:M0RT24	MapMan:35.1

Description

Probable E3 ubiquitin-protein ligase XBOS33 [Source:GMGC_GENE;Acc:GSMUA_Achr11G17440_001]

Coordinates

chr11:+:19010345..19014234

Molecular Weight (calculated)

31683.2 Da

IEP (calculated)

6.651

GRAVY (calculated)

0.055

Length

290 amino acids

Sequence
(BLAST)

001: MLLARGASRL TLNCNGWLPY DVARIWRRRC LESLLNPNSE LSLPVFPLSN YLSLPLMSIL NIARYCKIIC FCLLDYYNSH VICRESGLQS LIAVDDIDLC
101: AVCLERACSV ASEGCGHELC IQCALYLCST SNTPSEIVGP PGSIPCPFCR HGIVSFVKLP STPAKGFKPN LALSLCNPCI LHPRALDVPV ACRSEVRRNR
201: VAAVSSEIIC PLTCAPFTSG VIPSCNCDDD PCPSNGSQGE VQAQSAHSSH ITSDELEKME EQRADASCSG MFWGRRSCHR EHQCNSEINA

Best Arabidopsis Sequence Match ( AT5G07270.1 )
(BLAST)

001: MGNSFGCSAS GERLVSAARD GDFVEAKMLL DCNPCLAKYS TFGGLNSPLH FAAAKGHNEI VGLLLENGAD VNSRNYCGQT ALMQACRYGH WEVVQTLLLF
101: RCNVTRADYL AGRTALHFAA VNGHARCIRL VLADFLPSDK LNSLPETGVV TAKNKSEQSA LSKFVNKAAD GGITALHMAA LNGLFDCVQL LLDLEANVSA
201: VTFHYGTSMD MIGAGSTPLH YAACGGNLKC CQILLARGAR KMTLNCNGWL PIDIARMWSR HWLEPLLSPN SDVVIPAFPH SNYLSLPLLS ILNIAREFGL
301: QSATIGDEVD ICAVCLERTC TVAAEGCEHQ LCVRCALYLC SSSNVPSVTV GPPGSIPCPL CRHGITAFKR LPSSLTREMK LPMSLGFCAP CMLHTGDTTD
401: QSSPTCPPTE QRSSKTRAAS VSSDIFCPVT CSPFPSVNIP MCTCNEGTCP NFETHGTERH SEEHVESSPS RTTTEQEKIE EGQRLGKTTT CSSMFWGRRS
501: CSRENQCNSE INA

Arabidopsis Description

XBAT33XBAT33 [Source:UniProtKB/TrEMBL;Acc:A0A178U6J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.