Factsheet for GSMUA_Achr11P21710_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
endoplasmic reticulum 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plastid	42.33	81.65
VIT_16s0100g00690.t01	Wine grape	nucleus	70.1	70.51
Os10t0521600-01	Rice	cytosol	33.01	70.25
KRH09105	Soybean	nucleus	68.35	68.88
KRH38558	Soybean	nucleus	68.16	68.69
PGSC0003DMT400037056	Potato	cytosol, nucleus, plastid	68.16	68.69
Solyc03g026060.2.1	Tomato	cytosol, nucleus, plastid	67.96	68.49
KRG91461	Soybean	cytosol, nucleus, plastid	67.96	68.36
KRH35355	Soybean	nucleus	67.96	68.36
GSMUA_Achr11P...	Banana	mitochondrion	38.25	67.93
TraesCS1D01G187300.1	Wheat	cytosol	67.57	66.92
HORVU1Hr1G048560.1	Barley	cytosol	67.38	66.73
TraesCS1A01G189100.1	Wheat	cytosol	67.38	66.73
TraesCS1B01G196800.1	Wheat	cytosol	67.38	66.73
EER92045	Sorghum	cytosol, nucleus, plastid	66.21	65.58
Zm00001d029663_P001	Maize	cytosol	66.02	65.38
CDX98991	Canola	cytosol	63.11	63.23
Bra009278.1-P	Field mustard	cytosol	63.11	63.11
CDX70022	Canola	cytosol	63.11	63.11
AT5G07270.1	Thale cress	cytosol	62.52	62.77
CDY66355	Canola	cytosol	62.33	62.57
GSMUA_Achr1P07900_001	Banana	cytosol, nucleus, plastid	47.96	54.05
GSMUA_Achr1P10240_001	Banana	nucleus	43.3	50.23
GSMUA_Achr4P02080_001	Banana	nucleus	48.54	49.8
GSMUA_Achr3P04900_001	Banana	nucleus	46.21	49.69
CDY27425	Canola	cytosol	7.18	44.05
GSMUA_Achr7P18180_001	Banana	cytosol	25.83	30.16
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	25.63	30.0
GSMUA_Achr10P...	Banana	nucleus	25.05	29.45
GSMUA_Achr6P33430_001	Banana	nucleus	24.47	25.56

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr11G21710_001	EnsemblPlants:GSMUA_Achr11P21710_001	EnsemblPlants:GSMUA_Achr11T21710_001
InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683	InterPro:IPR036770	UniProt:M0RUA1
PFAM:PF00023	PFAM:PF13637	PRINTS:PR01415	ScanProsite:PS00518	PFscan:PS50088	PFscan:PS50089
PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF35	SMART:SM00184	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF57850	UniParc:UPI000295BA1C	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	SEG:seg

Description

Probable E3 ubiquitin-protein ligase XBOS33 [Source:GMGC_GENE;Acc:GSMUA_Achr11G21710_001]

Coordinates

chr11:+:22209635..22213331

Molecular Weight (calculated)

55162.1 Da

IEP (calculated)

7.237

GRAVY (calculated)

-0.011

Length

515 amino acids

Sequence
(BLAST)

001: MGNSLGCSAS GERLVSAARD GDLVEARMLL EFNPGLAKYS TFRGLNSPLH FAAAKGHNEI VTLLLENGAD VNLRNYCGQT ALMQASRHGH WEVVQTLVIF
101: RSIVSRADYL SGRTALHFAA FGGHVRCIRL LVADFIPSAP YEVIGSVKDG RGKGNSKGSS PDSSLDSKHD RFALLKFVDK PADGGVTALH MAALNGYFDC
201: LQLLLDLGAN VSAVTFHYGV SDNSIGNTPL HFAACGGNLK CCQMLLARGA SRLTLNCNGW LPLDVAKIWG RRCLEPLLNP NSELTVPIFP LSNYLSLPLM
301: SLLNIARESG LHSSIESDDN DLCAVCLERA CSVAAEGCGH ELCLRCALYL CSASNTPSQI ASPPGSIACP LCRNGIVSFI RLPGTPAKGL KPNLALSLCN
401: PCILPPRAVD IPATSCRTEV RRNRVAAVSS ELICPLACTP FPSAIPTCAT CNGDPFPSNE SQGEVQSQRL PHSSHATPGE LEKMEEPRVD ASCSGMFWSR
501: RSCHREHQCN SEIDS

Best Arabidopsis Sequence Match ( AT5G07270.1 )
(BLAST)

001: MGNSFGCSAS GERLVSAARD GDFVEAKMLL DCNPCLAKYS TFGGLNSPLH FAAAKGHNEI VGLLLENGAD VNSRNYCGQT ALMQACRYGH WEVVQTLLLF
101: RCNVTRADYL AGRTALHFAA VNGHARCIRL VLADFLPSDK LNSLPETGVV TAKNKSEQSA LSKFVNKAAD GGITALHMAA LNGLFDCVQL LLDLEANVSA
201: VTFHYGTSMD MIGAGSTPLH YAACGGNLKC CQILLARGAR KMTLNCNGWL PIDIARMWSR HWLEPLLSPN SDVVIPAFPH SNYLSLPLLS ILNIAREFGL
301: QSATIGDEVD ICAVCLERTC TVAAEGCEHQ LCVRCALYLC SSSNVPSVTV GPPGSIPCPL CRHGITAFKR LPSSLTREMK LPMSLGFCAP CMLHTGDTTD
401: QSSPTCPPTE QRSSKTRAAS VSSDIFCPVT CSPFPSVNIP MCTCNEGTCP NFETHGTERH SEEHVESSPS RTTTEQEKIE EGQRLGKTTT CSSMFWGRRS
501: CSRENQCNSE INA

Arabidopsis Description

XBAT33XBAT33 [Source:UniProtKB/TrEMBL;Acc:A0A178U6J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.