Factsheet for Zm00001d029663_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92045	Sorghum	cytosol, nucleus, plastid	96.15	96.15
Os10t0521600-01	Rice	cytosol	41.54	89.26
TraesCS1B01G196800.1	Wheat	cytosol	87.69	87.69
TraesCS1D01G187300.1	Wheat	cytosol	87.5	87.5
TraesCS1A01G189100.1	Wheat	cytosol	87.5	87.5
HORVU1Hr1G048560.1	Barley	cytosol	87.31	87.31
GSMUA_Achr11P...	Banana	plastid	35.38	68.91
GSMUA_Achr11P...	Banana	cytosol	65.38	66.02
VIT_16s0100g00690.t01	Wine grape	nucleus	64.42	65.43
PGSC0003DMT400037056	Potato	cytosol, nucleus, plastid	63.65	64.77
Solyc03g026060.2.1	Tomato	cytosol, nucleus, plastid	63.08	64.19
KRH38558	Soybean	nucleus	61.92	63.01
KRH35355	Soybean	nucleus	61.92	62.89
KRH09105	Soybean	nucleus	61.54	62.62
KRG91461	Soybean	cytosol, nucleus, plastid	61.54	62.5
CDX98991	Canola	cytosol	60.38	61.09
Bra009278.1-P	Field mustard	cytosol	60.0	60.58
CDX70022	Canola	cytosol	60.0	60.58
CDY66355	Canola	cytosol	59.42	60.23
AT5G07270.1	Thale cress	cytosol	58.65	59.45
GSMUA_Achr11P...	Banana	mitochondrion	32.69	58.62
Zm00001d045499_P001	Maize	cytosol	40.58	49.65
Zm00001d036014_P001	Maize	cytosol	38.65	49.14
Zm00001d052057_P013	Maize	cytosol, mitochondrion, nucleus, plasma membrane, plastid	47.5	44.5
CDY27425	Canola	cytosol	7.12	44.05
Zm00001d050184_P010	Maize	plasma membrane	43.46	43.05
Zm00001d047806_P001	Maize	cytosol	25.77	30.04
Zm00001d028616_P001	Maize	cytosol	25.38	29.6
Zm00001d041951_P001	Maize	cytosol	23.46	29.12
Zm00001d035657_P001	Maize	cytosol	18.65	28.53
Zm00001d011060_P001	Maize	cytosol	23.85	27.8
Zm00001d028254_P001	Maize	plastid	17.12	23.18
Zm00001d025843_P001	Maize	plastid	8.46	21.36

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
UniProt:B6SXU0	EMBL:EU957555	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001841
InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683	InterPro:IPR036770	ProteinID:ONL99315.1	PFAM:PF00023
PFAM:PF13637	PFAM:PF13857	PRINTS:PR01415	ScanProsite:PS00518	PFscan:PS50088	PFscan:PS50089
PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF35	SMART:SM00184	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF57850	UniParc:UPI000182CF33	EnsemblPlantsGene:Zm00001d029663	EnsemblPlants:Zm00001d029663_P001	EnsemblPlants:Zm00001d029663_T001	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	SEG:seg	:	:	:

Description

Pollen ankyrin-like protein

Coordinates

chr1:-:81796157..81800809

Molecular Weight (calculated)

55560.1 Da

IEP (calculated)

6.434

GRAVY (calculated)

-0.058

Length

520 amino acids

Sequence
(BLAST)

001: MGNSLGCSAS GERLVSAARD GDAIEARMLL ELSPALARYS TFGGLNTPLH FAAAKGHLDI VTMLLEKGAD VNARNYCGQT ALMHACRHGH WEVVQMLLLF
101: RCNVTRADYL SGRTALHFAA HDGFVRCIRL LVADFVPSVA LEDIASSVVD GGDCQTNSGS SPNSSSGQKF NESARVRYIN KPADGGVTAL HMAALNGHLD
201: CMQLLIDLGA NVSAVSFPYG TTANLIGAGS TPLHYAAGGG KQECCELLIS KGASRLTLNC NGWLPVDVAR IFGRRSLEPL LSPNSHSNVP VFQLSSYLAL
301: PLMSILNIAR EFGLQHTTPS IDDNDLCSVC LERSCSVTAE GCSHEFCIKC ALYLCSTSNI RVEFTGPPGS IPCPLCRNGI MSFTKLPSTP TEGLKSGSAL
401: TFCNPCILNA RSMDSPATFS KAEIRRNRVA AVSSELVCPI TCSPFPSSAL PTCRCSDDDP CGDTDVQDGP EFQSPRPSHS ASMELDKRGE GDLDRASCSG
501: MFWSRRSCHR EQQCDAEINA

Best Arabidopsis Sequence Match ( AT5G07270.1 )
(BLAST)

001: MGNSFGCSAS GERLVSAARD GDFVEAKMLL DCNPCLAKYS TFGGLNSPLH FAAAKGHNEI VGLLLENGAD VNSRNYCGQT ALMQACRYGH WEVVQTLLLF
101: RCNVTRADYL AGRTALHFAA VNGHARCIRL VLADFLPSDK LNSLPETGVV TAKNKSEQSA LSKFVNKAAD GGITALHMAA LNGLFDCVQL LLDLEANVSA
201: VTFHYGTSMD MIGAGSTPLH YAACGGNLKC CQILLARGAR KMTLNCNGWL PIDIARMWSR HWLEPLLSPN SDVVIPAFPH SNYLSLPLLS ILNIAREFGL
301: QSATIGDEVD ICAVCLERTC TVAAEGCEHQ LCVRCALYLC SSSNVPSVTV GPPGSIPCPL CRHGITAFKR LPSSLTREMK LPMSLGFCAP CMLHTGDTTD
401: QSSPTCPPTE QRSSKTRAAS VSSDIFCPVT CSPFPSVNIP MCTCNEGTCP NFETHGTERH SEEHVESSPS RTTTEQEKIE EGQRLGKTTT CSSMFWGRRS
501: CSRENQCNSE INA

Arabidopsis Description

XBAT33XBAT33 [Source:UniProtKB/TrEMBL;Acc:A0A178U6J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.