Factsheet for Zm00001d041951_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02150	Sorghum	cytosol	87.35	75.62
Os01t0974400-01	Rice	cytosol	69.45	65.25
TraesCS3D01G537900.1	Wheat	cytosol	70.17	64.19
TraesCS3B01G609500.1	Wheat	cytosol	70.64	63.79
TraesCS3A01G532700.1	Wheat	cytosol	69.69	63.2
Zm00001d035657_P001	Maize	cytosol	50.84	62.65
Zm00001d011060_P001	Maize	cytosol	65.63	61.66
Zm00001d047806_P001	Maize	cytosol	60.38	56.73
Zm00001d028616_P001	Maize	cytosol	59.9	56.28
HORVU3Hr1G116350.2	Barley	plastid	57.28	51.84
TraesCS7D01G304700.1	Wheat	cytosol	22.67	46.57
Zm00001d025843_P001	Maize	plastid	22.2	45.15
Zm00001d028254_P001	Maize	plastid	40.1	43.75
Zm00001d036014_P001	Maize	cytosol	27.68	28.36
Zm00001d045499_P001	Maize	cytosol	27.21	26.82
Zm00001d029663_P001	Maize	cytosol	29.12	23.46
Zm00001d050184_P010	Maize	plasma membrane	28.64	22.86
Zm00001d052057_P013	Maize	cytosol, mitochondrion, nucleus, plasma membrane, plastid	29.59	22.34

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	UniProt:A0A096Q0D7	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001841	InterPro:IPR002110
InterPro:IPR013083	InterPro:IPR020683	InterPro:IPR036770	ProteinID:ONM34147.1	PFAM:PF12796	PFscan:PS50088
PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF20	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF57850	UniParc:UPI0002217F01	EnsemblPlantsGene:Zm00001d041951	EnsemblPlants:Zm00001d041951_P001	EnsemblPlants:Zm00001d041951_T001	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

Ring zinc finger protein

Coordinates

chr3:-:144984922..144986824

Molecular Weight (calculated)

44969.9 Da

IEP (calculated)

7.515

GRAVY (calculated)

-0.065

Length

419 amino acids

Sequence
(BLAST)

001: MGHVLSCSRD GADLFRAVQH GDLDALLAVD PELARRATTI YDRLSLLHIA AANGQLQVLS MLLFDDGGAG GNVDVLNRKK QTPLMLAAMH GRTDCVLSLL
101: DAGANILMFD SVHARTCLHH AAYYGHAHCL QAILSAAKTT PVADSWGFAR FVNVRDEHGA TPLHLAARQG RPQCVRHLLH AGAIVSAPTA SYGFPGSTAL
201: HLAARRGNLD CVRELLAWGA DRLHRDSAGR IAYAVALKHS HRECAALLNP AAAEPMVWPS PLKFISELSP EAKVLLEGAL MEANREREKR ITDTTTKTNN
301: DGGLDDDDEQ LCGICLEQAC TMEVQDCGHQ MCAACTLALC CHSKPNPTTL ALQPPACPFC RATITRLLVA NSKTTATSNS FRGLTSAIRS LSLSRIARGS
401: GRVADSSLPQ SFFEEQGSK

Best Arabidopsis Sequence Match ( AT2G28840.1 )
(BLAST)

001: MGQSMSCGSR PEHGIFASVQ CGDIITIRRV MATEPSLLNQ TTPYDRHSVL HVAAANGQIE ILSLLLERFT NPDLLNRHKQ TPLMLAAMYG RISCVKKLAE
101: VGANILMFDS VNRRTCLHYA AYYGHANCVQ AILSAAQSSP VAVHWGYARF VNIRDDKGAT PLHLAARQRR PECVNVLLDS GSLVCASTSV YGSPGSTPLH
201: LAARSGSIDC VRKLLAWGAD RLQRDASGRI PYVVAMKHKH GACGALLNPS SAEPLVWPSP LKFISELNDE AKLLLEQALM EANREREKTI LKGTAYSLPS
301: PSFSDTDDNM SEVSDTELCC ICFEQVCTIE VKDCGHQMCA QCTLALCCHN KPNPTTSTVT PPVCPFCRST IACLVVAQNN NNNNEKSKSL DDVVVVDREA
401: GDVSSSKFRK HRRSINLGEE SSSFMGLSTI GSFGRITGRG SGRIAAENEL MDKPIL

Arabidopsis Description

XBAT31Putative E3 ubiquitin-protein ligase XBAT31 [Source:UniProtKB/Swiss-Prot;Acc:Q94B55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.