Factsheet for Zm00001d052057_P013

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol, plasma membrane, nucleus

Predictor Summary:

plasma membrane 1
mitochondrion 2
plastid 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05937	Sorghum	nucleus	82.7	92.35
TraesCS6A01G352300.1	Wheat	cytosol	79.1	87.8
TraesCS6D01G335000.2	Wheat	cytosol	78.92	87.6
TraesCS6B01G385200.1	Wheat	cytosol	78.92	87.43
Os02t0791200-01	Rice	mitochondrion	78.2	81.73
PGSC0003DMT400029191	Potato	cytosol, mitochondrion, nucleus, plastid	60.72	66.6
VIT_11s0037g01410.t01	Wine grape	cytosol, nucleus, plastid	60.0	65.42
Solyc07g006350.2.1	Tomato	cytosol, nucleus, plastid	60.0	64.79
KRH18952	Soybean	cytosol, nucleus, plastid	57.12	62.4
KRH02947	Soybean	cytosol, nucleus, plastid	56.4	61.37
AT5G57740.1	Thale cress	cytosol	55.68	60.83
CDY51284	Canola	cytosol	55.14	60.71
CDY02760	Canola	cytosol	55.32	60.67
Bra020414.1-P	Field mustard	plastid	54.95	60.4
Bra002699.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	55.14	59.42
Zm00001d050184_P010	Maize	plasma membrane	53.33	56.38
CDY25888	Canola	extracellular, vacuole	45.05	54.23
VIT_18s0001g14720.t01	Wine grape	cytosol	8.29	51.11
Zm00001d029663_P001	Maize	cytosol	44.5	47.5
Zm00001d036014_P001	Maize	cytosol	34.05	46.21
Zm00001d045499_P001	Maize	cytosol	34.41	44.94
CDY65199	Canola	cytosol, mitochondrion, nucleus	15.86	40.93
Bra020415.1-P	Field mustard	mitochondrion	14.77	38.68
Zm00001d035657_P001	Maize	cytosol	19.1	31.18
Zm00001d041951_P001	Maize	cytosol	22.34	29.59
Zm00001d011060_P001	Maize	cytosol	23.06	28.7
Zm00001d028616_P001	Maize	cytosol	23.06	28.7
Zm00001d047806_P001	Maize	cytosol	23.06	28.7
Zm00001d028254_P001	Maize	plastid	13.87	20.05
Zm00001d025843_P001	Maize	plastid	7.03	18.93

Protein Annotations

Gene3D:1.25.40.20	Gene3D:1.25.40.960	EntrezGene:100279188	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	UniProt:A0A1D6QCH9
ProteinID:AQK55916.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0016874	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083
InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796	PFAM:PF13637	PRINTS:PR01415	ScanProsite:PS00518
PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF22	SMART:SM00184
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	UniParc:UPI000843DB12	EnsemblPlantsGene:Zm00001d052057	EnsemblPlants:Zm00001d052057_P013
EnsemblPlants:Zm00001d052057_T013	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	:	:

Description

E3 ubiquitin-protein ligase XBAT32

Coordinates

chr4:-:177962704..177966906

Molecular Weight (calculated)

59991.4 Da

IEP (calculated)

7.664

GRAVY (calculated)

0.146

Length

555 amino acids

Sequence
(BLAST)

001: MGFLSLVGNS FGCSASGERL VSAARDGDLQ EARALLQYNP RLARYSTFGG RNSPLHYAAA QGHHEVMSFV LQRSIIIRVI LFAFKYVCSL DVQIVSLLLE
101: SGVEINLRNY RGQTALMQAC QYGHWEVVQT LILFNANVSF FPLHSTTTFL TVCRISCLGL IWQNGIQVHR TDYLNGGTAL HFAALHGHAR CLRLVLADYV
201: PSVPNFCTLV NHKSSEEDST ADFDHDALVK MVNQKADGGL TPLHMAALNG HVECVQLLLD LGASVSEVTI EDGTTIDLIG AGSTPLHYAA CGGNAVCCQL
301: LIARGACIAV QNASGWTPLM VARSWQRNSV EEILSREPEG RIHTLPSPYL CLPLMSIMNI ARECGWRYLN QSPVCIDPCA VCLEGSCSVA AEGCKHEFCT
401: RCALYLCSTS YTSASPAGAI PCPLCRHPII SFNTLPGTSP IRELPRNSLS LSFCTACPAV SSDSSAPVGA HPCRSEFQCV RLPPMGSSSF RSLSCQRIPA
501: MKLHPSFCMG SMDTNPCLIR CSRFGSGLGR SASQREGATR RAWPVTFSPI AATGS

Best Arabidopsis Sequence Match ( AT5G57740.1 )
(BLAST)

001: MRFLSLVGNS FGCSASGERL VSAARDGDLQ EAKALLDYNP RLARYSTFGV RNSPLHYSAA QGHHEIVSLL VESGVDINLR NYRGQTALMQ ACQHGHWEVV
101: LILILFGANI HRSDYLNGGT ALHLAALNGH PRCIRILLSE YIPSVPNCWS LLKNKKTSVA GFDSSVLHEV INRAADGGIT PLHVAALNGH IETVQLLLDL
201: GASVTQVTVE DGTTIDLIGA GSTALHYASC GGNTQCCQLL ISKGACLAAV NSNGWTPMMV ARSWHRNWLE EILNPTTEQP QLHLPNVPSP FLCLPLMSIV
301: NIAQECGWRE NDCLTPCRDP CAVCLERKCT VAADGCAHEF CTNCALYLST TSITSSKTSN VTPGSVPCPL CRNGIVSFTK LPHTTATTRT STSSRTSISL
401: SFCTCSSDVL DTALLTNPHY SCKPVVSRTG SRTPQSARSS AFRSLSCRRF PPSLCLGGSD VDEPRSRLIG GSYSRSGVGF RRSTSQVEGK RSWFSALNHC
501: VTTGGSAC

Arabidopsis Description

XBAT32XBAT32 [Source:UniProtKB/TrEMBL;Acc:A0A178UH83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.