Factsheet for Bra020414.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02760	Canola	cytosol	99.01	98.81
AT5G57740.1	Thale cress	cytosol	90.69	90.16
Bra002699.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	90.3	88.54
Bra020415.1-P	Field mustard	mitochondrion	34.06	81.13
PGSC0003DMT400029191	Potato	cytosol, mitochondrion, nucleus, plastid	66.73	66.6
KRH18952	Soybean	cytosol, nucleus, plastid	66.34	65.94
Solyc07g006350.2.1	Tomato	cytosol, nucleus, plastid	66.53	65.37
KRH02947	Soybean	cytosol, nucleus, plastid	65.15	64.51
GSMUA_Achr3P04900_001	Banana	nucleus	60.59	63.88
GSMUA_Achr4P02080_001	Banana	nucleus	62.77	63.15
GSMUA_Achr1P10240_001	Banana	nucleus	55.05	62.61
EES05937	Sorghum	nucleus	60.2	61.17
TraesCS6A01G352300.1	Wheat	cytosol	59.21	59.8
TraesCS6D01G335000.2	Wheat	cytosol	59.21	59.8
TraesCS6B01G385200.1	Wheat	cytosol	59.21	59.68
Os02t0791200-01	Rice	mitochondrion	60.4	57.44
Zm00001d052057_P013	Maize	cytosol, mitochondrion, nucleus, plasma membrane, plastid	60.4	54.95
TraesCS7A01G145900.1	Wheat	cytosol	52.28	54.89
HORVU7Hr1G029900.6	Barley	cytosol	51.68	54.83
TraesCS7D01G147400.1	Wheat	cytosol	51.88	54.47
OQU80200	Sorghum	nucleus	51.88	54.24
TraesCS7B01G048300.1	Wheat	cytosol	51.49	54.05
Os08t0258200-02	Rice	nucleus	52.08	53.13
Zm00001d050184_P010	Maize	plasma membrane	51.88	49.9
Bra009278.1-P	Field mustard	cytosol	46.53	45.63
Bra035664.1-P	Field mustard	nucleus	23.96	26.83
Bra011923.1-P	Field mustard	nucleus	24.16	26.7
Bra000480.1-P	Field mustard	plastid	22.57	23.12

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
EnsemblPlantsGene:Bra020414	EnsemblPlants:Bra020414.1	EnsemblPlants:Bra020414.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0006511	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009653	GO:GO:0009719	GO:GO:0009733
GO:GO:0009791	GO:GO:0009987	GO:GO:0010311	GO:GO:0010366	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0051865	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683
InterPro:IPR036770	UniProt:M4DV71	PFAM:PF12796	PRINTS:PR01415	ScanProsite:PS00518	PFscan:PS50088
PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF22	SMART:SM00184	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF57850	UniParc:UPI0002545D0C	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS
SEG:seg	:	:	:	:	:

Description

AT5G57740 (E=3e-238) XBAT32 | XBAT32; protein binding / zinc ion binding

Coordinates

chrA02:+:6608302..6610566

Molecular Weight (calculated)

53892.2 Da

IEP (calculated)

7.359

GRAVY (calculated)

-0.027

Length

505 amino acids

Sequence
(BLAST)

001: MRFLSLVGNS FGCSASGERL VSAARDGDLQ EAKALLDYNP RLSRYSTFGV RNSPLHYSAA QGHHEIVSLL VESGVDINLR NYRGQTALMQ ACQHGHWEVV
101: LILILFGANI HRSDYLNGGT ALHLAALNGH PRCIRILLSE YIPSVPNCWS LLKNSKSSVS GFDPSGIQEV INRAADGGIT PLHVAALNGH VETVQLLLDL
201: GASLTQVTVE DGTTIDLIGA GSTPLHYASC GGNTQCCQVL IDKGASLAAI NSNGWTPLMV ARSWHRNCLE EVLNPTTEQP LSQLPKVPSP FLCLPLMSIV
301: KIAQECGWRG DDCLTPCRDP CAVCLERKCT VAADGCGHEF CTNCALYLST TNITSSKTSQ ATPGSVPCPL CRYGIVSFTK LPHTIPTTTA TSSRTSISLS
401: FCTCSSSDVL DTGALLTDPH YSCKPVVSRT GSQSVGSSSF RSLSCRFPPS LCLGGSDVDE PQSRLMNGSY SRSGLGSRRS TSEVEGKRSW FCALNHCVTT
501: GGSPC

Best Arabidopsis Sequence Match ( AT5G57740.1 )
(BLAST)

001: MRFLSLVGNS FGCSASGERL VSAARDGDLQ EAKALLDYNP RLARYSTFGV RNSPLHYSAA QGHHEIVSLL VESGVDINLR NYRGQTALMQ ACQHGHWEVV
101: LILILFGANI HRSDYLNGGT ALHLAALNGH PRCIRILLSE YIPSVPNCWS LLKNKKTSVA GFDSSVLHEV INRAADGGIT PLHVAALNGH IETVQLLLDL
201: GASVTQVTVE DGTTIDLIGA GSTALHYASC GGNTQCCQLL ISKGACLAAV NSNGWTPMMV ARSWHRNWLE EILNPTTEQP QLHLPNVPSP FLCLPLMSIV
301: NIAQECGWRE NDCLTPCRDP CAVCLERKCT VAADGCAHEF CTNCALYLST TSITSSKTSN VTPGSVPCPL CRNGIVSFTK LPHTTATTRT STSSRTSISL
401: SFCTCSSDVL DTALLTNPHY SCKPVVSRTG SRTPQSARSS AFRSLSCRRF PPSLCLGGSD VDEPRSRLIG GSYSRSGVGF RRSTSQVEGK RSWFSALNHC
501: VTTGGSAC

Arabidopsis Description

XBAT32XBAT32 [Source:UniProtKB/TrEMBL;Acc:A0A178UH83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.