Factsheet for Bra002699.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51284	Canola	cytosol	96.12	98.21
Bra020414.1-P	Field mustard	plastid	88.54	90.3
Bra020415.1-P	Field mustard	mitochondrion	29.9	72.64
PGSC0003DMT400029191	Potato	cytosol, mitochondrion, nucleus, plastid	63.88	65.02
KRH18952	Soybean	cytosol, nucleus, plastid	64.08	64.96
Solyc07g006350.2.1	Tomato	cytosol, nucleus, plastid	64.08	64.2
KRH02947	Soybean	cytosol, nucleus, plastid	62.91	63.53
GSMUA_Achr3P04900_001	Banana	nucleus	58.25	62.63
GSMUA_Achr4P02080_001	Banana	nucleus	60.58	62.15
EES05937	Sorghum	nucleus	59.61	61.77
GSMUA_Achr1P10240_001	Banana	nucleus	53.01	61.49
TraesCS6B01G385200.1	Wheat	cytosol	58.06	59.68
TraesCS6A01G352300.1	Wheat	cytosol	57.86	59.6
TraesCS6D01G335000.2	Wheat	cytosol	57.67	59.4
Os02t0791200-01	Rice	mitochondrion	59.81	58.0
TraesCS7A01G145900.1	Wheat	cytosol	51.84	55.51
HORVU7Hr1G029900.6	Barley	cytosol	51.26	55.46
Zm00001d052057_P013	Maize	cytosol, mitochondrion, nucleus, plasma membrane, plastid	59.42	55.14
TraesCS7D01G147400.1	Wheat	cytosol	51.46	55.09
OQU80200	Sorghum	nucleus	51.46	54.87
TraesCS7B01G048300.1	Wheat	cytosol	51.07	54.68
Os08t0258200-02	Rice	nucleus	51.84	53.94
Zm00001d050184_P010	Maize	plasma membrane	51.46	50.48
Bra009278.1-P	Field mustard	cytosol	46.02	46.02
Bra035664.1-P	Field mustard	nucleus	23.5	26.83
Bra011923.1-P	Field mustard	nucleus	23.69	26.7
Bra000480.1-P	Field mustard	plastid	21.75	22.72

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
EnsemblPlantsGene:Bra002699	EnsemblPlants:Bra002699.1	EnsemblPlants:Bra002699.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083	InterPro:IPR020683	InterPro:IPR036770	UniProt:M4CER8
PFAM:PF12796	ScanProsite:PS00518	PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128
PANTHER:PTHR24128:SF22	SMART:SM00184	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	UniParc:UPI0002545161
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	SEG:seg	:	:

Description

AT5G57740 (E=1e-241) XBAT32 | XBAT32; protein binding / zinc ion binding

Coordinates

chrA10:-:8177163..8179340

Molecular Weight (calculated)

55318.7 Da

IEP (calculated)

7.823

GRAVY (calculated)

-0.081

Length

515 amino acids

Sequence
(BLAST)

001: MRFLSLVGNS FGCSASGERL VSAARDGDLQ EAKALLDYNP RLARYSTFGV RNSPLHYSAA QGHHEIVSLL VESGVDINLR NYRGQTALMQ ACQHGHWEVV
101: LTLILFGANI HRSDYINGGT ALHLAALNGH PRCIRILLSE YIPSVPNCWS LLKSNKTSVS GFDRSVLQEV INRAADGGIT PLHVAALNGH IETVQLLLDL
201: GASVTQVTVE DGTTIDLIGA GSTALHYASC GGNIQCCQLL IGKGAPLAAI NSNGWTPLMV ARSWHRDWLE ETLNPTTEQQ PQSHPPKVPS PFLCLPLMSI
301: VKIAQECGWR ENDCLTPCRD PCAVCLERKC TVSADGCGHE FCTNCALYLS TTTNTSSKTT SQATPGSVPC PLCRYGIASF TRLPETTAIT TTVTSSRTSI
401: SLSFCTCSSS SDVLDTALLT TNTQYSCNKP VVSRTGSRIS QSVGSSSSFR SLSCHRFPPS LCLGGSDVDE PQRRLMNGSY SRSGLGFRRS ASQVEGKRSW
501: FSAFNHCVTA GGTAC

Best Arabidopsis Sequence Match ( AT5G57740.1 )
(BLAST)

001: MRFLSLVGNS FGCSASGERL VSAARDGDLQ EAKALLDYNP RLARYSTFGV RNSPLHYSAA QGHHEIVSLL VESGVDINLR NYRGQTALMQ ACQHGHWEVV
101: LILILFGANI HRSDYLNGGT ALHLAALNGH PRCIRILLSE YIPSVPNCWS LLKNKKTSVA GFDSSVLHEV INRAADGGIT PLHVAALNGH IETVQLLLDL
201: GASVTQVTVE DGTTIDLIGA GSTALHYASC GGNTQCCQLL ISKGACLAAV NSNGWTPMMV ARSWHRNWLE EILNPTTEQP QLHLPNVPSP FLCLPLMSIV
301: NIAQECGWRE NDCLTPCRDP CAVCLERKCT VAADGCAHEF CTNCALYLST TSITSSKTSN VTPGSVPCPL CRNGIVSFTK LPHTTATTRT STSSRTSISL
401: SFCTCSSDVL DTALLTNPHY SCKPVVSRTG SRTPQSARSS AFRSLSCRRF PPSLCLGGSD VDEPRSRLIG GSYSRSGVGF RRSTSQVEGK RSWFSALNHC
501: VTTGGSAC

Arabidopsis Description

XBAT32XBAT32 [Source:UniProtKB/TrEMBL;Acc:A0A178UH83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.