Factsheet for TraesCS7A01G145900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G147400.1	Wheat	cytosol	98.13	98.13
TraesCS7B01G048300.1	Wheat	cytosol	97.92	97.92
HORVU7Hr1G029900.6	Barley	cytosol	93.97	94.96
OQU80200	Sorghum	nucleus	85.24	84.89
Os08t0258200-02	Rice	nucleus	82.74	80.4
Zm00001d050184_P010	Maize	plasma membrane	85.45	78.29
GSMUA_Achr1P10240_001	Banana	nucleus	57.59	62.39
PGSC0003DMT400029191	Potato	cytosol, mitochondrion, nucleus, plastid	62.37	59.29
VIT_11s0037g01410.t01	Wine grape	cytosol, nucleus, plastid	61.54	58.15
TraesCS6A01G352300.1	Wheat	cytosol	60.08	57.8
KRH18952	Soybean	cytosol, nucleus, plastid	60.29	57.09
Solyc07g006350.2.1	Tomato	cytosol, nucleus, plastid	60.91	57.0
KRH02947	Soybean	cytosol, nucleus, plastid	59.88	56.47
CDY51284	Canola	cytosol	55.3	52.78
CDY02760	Canola	cytosol	55.51	52.77
Bra020414.1-P	Field mustard	plastid	54.89	52.28
AT5G57740.1	Thale cress	cytosol	54.89	51.97
Bra002699.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	55.51	51.84
VIT_18s0001g14720.t01	Wine grape	cytosol	8.94	47.78
CDY25888	Canola	extracellular, vacuole	45.74	47.72
TraesCS1A01G189100.1	Wheat	cytosol	45.95	42.5
TraesCS7A01G060700.1	Wheat	cytosol	36.59	39.91
TraesCS4A01G429100.1	Wheat	cytosol	36.17	39.64
CDY65199	Canola	cytosol, mitochondrion, nucleus	16.01	35.81
Bra020415.1-P	Field mustard	mitochondrion	14.55	33.02
TraesCS3A01G532700.1	Wheat	cytosol	27.03	28.14
TraesCS1A01G034300.2	Wheat	cytosol	25.36	27.05
TraesCS4A01G097000.2	Wheat	cytosol	25.36	26.87

Protein Annotations

Gene3D:1.25.40.20	Gene3D:1.25.40.960	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001841	InterPro:IPR002110
InterPro:IPR013083	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF00023	PFAM:PF12796	PRINTS:PR01415
ScanProsite:PS00518	PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF22
SMART:SM00184	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS7A01G145900	EnsemblPlants:TraesCS7A01G145900.1
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	TIGR:cd00204	SEG:seg	:

Description

No Description!

Coordinates

chr7A:-:97574764..97578075

Molecular Weight (calculated)

51387.0 Da

IEP (calculated)

8.369

GRAVY (calculated)

0.070

Length

481 amino acids

Sequence
(BLAST)

001: MGLLGMMGDS FGCSATGERL VSAARDGDIQ EARALLELNP RLARYSTFGI RNTPLHYSAA KGHHEIVSLL IESGVDINLR NCRGQTALMQ ACLYGHWKVV
101: QILVLFKANI HKKDCFSGAT AIHFAALKGH TRCIRLIAAD YVPSLPDFWS IMRGTATDET NKEAFDAANL QKLVNAKSDG GVTPLHLAAL HGHAESLQLL
201: LDLGASVSEV TVNDGSTIDL IGSGSTALHY AACGGSAVCC QLLIAAGAHM GAENANRLSP LMVARSWHKT GAEGVLSKQP EGRLLILPSP YLSLPLMSIV
301: KIARECGWRK TSASSSSCHD PCVICLEMEC TVAAEGCGHE FCTKCALYLC STTSSSTCTR GVPGSISCPL CRHTIVSFVK LTGTTFLKEL PWTSSSLALC
401: AAGASTGSLR RPADIRRVRS SSVHLGCSSF RSTGSGRLSS IKLNCGRLDE TLPCLVSCIR PDVRRSSSYR ERVGSRYTEF S

Best Arabidopsis Sequence Match ( AT5G57740.1 )
(BLAST)

001: MRFLSLVGNS FGCSASGERL VSAARDGDLQ EAKALLDYNP RLARYSTFGV RNSPLHYSAA QGHHEIVSLL VESGVDINLR NYRGQTALMQ ACQHGHWEVV
101: LILILFGANI HRSDYLNGGT ALHLAALNGH PRCIRILLSE YIPSVPNCWS LLKNKKTSVA GFDSSVLHEV INRAADGGIT PLHVAALNGH IETVQLLLDL
201: GASVTQVTVE DGTTIDLIGA GSTALHYASC GGNTQCCQLL ISKGACLAAV NSNGWTPMMV ARSWHRNWLE EILNPTTEQP QLHLPNVPSP FLCLPLMSIV
301: NIAQECGWRE NDCLTPCRDP CAVCLERKCT VAADGCAHEF CTNCALYLST TSITSSKTSN VTPGSVPCPL CRNGIVSFTK LPHTTATTRT STSSRTSISL
401: SFCTCSSDVL DTALLTNPHY SCKPVVSRTG SRTPQSARSS AFRSLSCRRF PPSLCLGGSD VDEPRSRLIG GSYSRSGVGF RRSTSQVEGK RSWFSALNHC
501: VTTGGSAC

Arabidopsis Description

XBAT32XBAT32 [Source:UniProtKB/TrEMBL;Acc:A0A178UH83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.