CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002699.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	98.21	96.12
CDY25888	Canola	extracellular, vacuole	85.32	93.28
CDY02760	Canola	cytosol	90.48	90.12
CDY65199	Canola	cytosol, mitochondrion, nucleus	31.94	74.88
PGSC0003DMT400029191	Potato	cytosol, mitochondrion, nucleus, plastid	65.48	65.22
KRH18952	Soybean	cytosol, nucleus, plastid	65.48	64.96
Solyc07g006350.2.1	Tomato	cytosol, nucleus, plastid	65.67	64.4
KRH02947	Soybean	cytosol, nucleus, plastid	64.29	63.53
GSMUA_Achr3P04900_001	Banana	nucleus	59.92	63.05
GSMUA_Achr4P02080_001	Banana	nucleus	62.3	62.55
EES05937	Sorghum	nucleus	60.91	61.77
GSMUA_Achr1P10240_001	Banana	nucleus	54.37	61.71
TraesCS6B01G385200.1	Wheat	cytosol	59.33	59.68
TraesCS6A01G352300.1	Wheat	cytosol	59.13	59.6
TraesCS6D01G335000.2	Wheat	cytosol	58.93	59.4
Os02t0791200-01	Rice	mitochondrion	61.31	58.19
HORVU7Hr1G029900.6	Barley	cytosol	52.38	55.46
TraesCS7A01G145900.1	Wheat	cytosol	52.78	55.3
Zm00001d052057_P013	Maize	cytosol, mitochondrion, nucleus, plasma membrane, plastid	60.71	55.14
TraesCS7D01G147400.1	Wheat	cytosol	52.38	54.89
OQU80200	Sorghum	nucleus	52.58	54.87
TraesCS7B01G048300.1	Wheat	cytosol	51.98	54.47
Os08t0258200-02	Rice	nucleus	52.38	53.33
CDY27425	Canola	cytosol	8.53	51.19
Zm00001d050184_P010	Maize	plasma membrane	52.58	50.48
CDY66355	Canola	cytosol	47.22	46.39
CDX70022	Canola	cytosol	47.22	46.21
CDX98991	Canola	cytosol	46.83	45.91
CDY47891	Canola	cytosol	24.01	26.59
CDX77214	Canola	cytosol	23.81	26.49
CDY15789	Canola	cytosol	23.81	26.32
CDX83303	Canola	cytosol	23.02	25.49
CDY31737	Canola	cytosol	23.81	25.16
CDX95759	Canola	cytosol	23.02	24.89

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	GO:A0A078IPE1	UniProt:A0A078IPE1	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY51284	ProteinID:CDY51284	ProteinID:CDY51284.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00003079001	InterPro:IPR001841	InterPro:IPR002110
InterPro:IPR013083	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF00097	PFAM:PF12796	PRINTS:PR01415
ScanProsite:PS00518	PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF22
SMART:SM00184	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	UniParc:UPI0004EDBE28	InterPro:Znf_C3HC4_RING-type
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	SEG:seg	:	:

Description

BnaA10g11640DBnaA10g11640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPE1]

Coordinates

chrLK032981:+:76533..78816

Molecular Weight (calculated)

54121.2 Da

IEP (calculated)

7.608

GRAVY (calculated)

-0.077

Length

504 amino acids

Sequence
(BLAST)

001: MRFLSLVGNS FGCSASGERL VSAARDGDLQ EAKALLDYNP RLARYSTFGV RNSPLHYSAA QGHHEIVSLL VESGVDINLR NYRGQTALMQ ACQHGHWEVV
101: LTLILFGANI HRSDYINGGT ALHLAALNGH PRCIRILLSE YIPSVPNCWS LLKSNKSSVS GFDRSVLQEV INRAADGGIT PLHVAALNGH IETVQLLLDL
201: GASVTQVTVE DGTTIDLIGA GSTALHYASC GGNTQCCQLL IGKGASLAAI NSNGWTPLMV ARSWHREWLE ETLNPTTEQQ PQSYPPKVPS PFLCLPLMSI
301: VKIAQECGWR ENDCLTPCRD PCAVCLERKC TVAADGCGHE FCTNCALYLS TTTNTSSKTT SQATPGSVPC PLCRYGIASF TRLPETTAIT ATVTSSRTSI
401: SLSFCTCSSS SDVLDSALLT TNTQYSCNKP SVGSSSSFRS LSCHRFPPSL CLGGSDVDEP QRRLMNGSYS RSGLGFRRST SQVEGKRSWF SAFNHCVTAG
501: GTAC

Best Arabidopsis Sequence Match ( AT5G57740.1 )
(BLAST)

001: MRFLSLVGNS FGCSASGERL VSAARDGDLQ EAKALLDYNP RLARYSTFGV RNSPLHYSAA QGHHEIVSLL VESGVDINLR NYRGQTALMQ ACQHGHWEVV
101: LILILFGANI HRSDYLNGGT ALHLAALNGH PRCIRILLSE YIPSVPNCWS LLKNKKTSVA GFDSSVLHEV INRAADGGIT PLHVAALNGH IETVQLLLDL
201: GASVTQVTVE DGTTIDLIGA GSTALHYASC GGNTQCCQLL ISKGACLAAV NSNGWTPMMV ARSWHRNWLE EILNPTTEQP QLHLPNVPSP FLCLPLMSIV
301: NIAQECGWRE NDCLTPCRDP CAVCLERKCT VAADGCAHEF CTNCALYLST TSITSSKTSN VTPGSVPCPL CRNGIVSFTK LPHTTATTRT STSSRTSISL
401: SFCTCSSDVL DTALLTNPHY SCKPVVSRTG SRTPQSARSS AFRSLSCRRF PPSLCLGGSD VDEPRSRLIG GSYSRSGVGF RRSTSQVEGK RSWFSALNHC
501: VTTGGSAC

Arabidopsis Description

XBAT32XBAT32 [Source:UniProtKB/TrEMBL;Acc:A0A178UH83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.