Factsheet for TraesCS7B01G048300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G147400.1	Wheat	cytosol	98.96	98.96
TraesCS7A01G145900.1	Wheat	cytosol	97.92	97.92
HORVU7Hr1G029900.6	Barley	cytosol	94.59	95.59
OQU80200	Sorghum	nucleus	85.03	84.68
Os08t0258200-02	Rice	nucleus	82.95	80.61
Zm00001d050184_P010	Maize	plasma membrane	85.24	78.1
GSMUA_Achr1P10240_001	Banana	nucleus	57.38	62.16
PGSC0003DMT400029191	Potato	cytosol, mitochondrion, nucleus, plastid	62.58	59.49
VIT_11s0037g01410.t01	Wine grape	cytosol, nucleus, plastid	61.75	58.35
TraesCS6B01G385200.1	Wheat	cytosol	60.29	57.88
KRH18952	Soybean	cytosol, nucleus, plastid	60.5	57.28
Solyc07g006350.2.1	Tomato	cytosol, nucleus, plastid	61.12	57.2
KRH02947	Soybean	cytosol, nucleus, plastid	60.08	56.67
CDY51284	Canola	cytosol	54.47	51.98
CDY02760	Canola	cytosol	54.68	51.98
AT5G57740.1	Thale cress	cytosol	54.47	51.57
Bra020414.1-P	Field mustard	plastid	54.05	51.49
Bra002699.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	54.68	51.07
VIT_18s0001g14720.t01	Wine grape	cytosol	8.94	47.78
CDY25888	Canola	extracellular, vacuole	44.91	46.85
TraesCS1B01G196800.1	Wheat	cytosol	45.32	41.92
CDY65199	Canola	cytosol, mitochondrion, nucleus	15.18	33.95
Bra020415.1-P	Field mustard	mitochondrion	13.93	31.6
TraesCS4B01G207400.1	Wheat	cytosol	26.2	28.19
TraesCS3B01G609500.1	Wheat	cytosol	27.03	28.02
TraesCS1B01G050200.3	Wheat	cytosol	25.78	25.51

Protein Annotations

Gene3D:1.25.40.20	Gene3D:1.25.40.960	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001841	InterPro:IPR002110
InterPro:IPR013083	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF00023	PFAM:PF12796	PRINTS:PR01415
ScanProsite:PS00518	PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF22
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS7B01G048300	EnsemblPlants:TraesCS7B01G048300.1	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	TIGR:cd00204	SEG:seg	:	:

Description

No Description!

Coordinates

chr7B:-:48187853..48193545

Molecular Weight (calculated)

51390.0 Da

IEP (calculated)

8.305

GRAVY (calculated)

0.083

Length

481 amino acids

Sequence
(BLAST)

001: MGLLGMMGDS FGCSATGERL VSAARDGDIQ EARALLELNP RLARYSTFGI RNTPLHYSAA KGHHEIVSLL IESGVDINLR NCRGQTALMQ ACLYGHWKVV
101: QILVLFKANI HKKDCFSGAT AIHFAALKGH TRCIRLIAAD YVPSLPDFWS IMRGTATGET NKEAFDAANL QRLVNAKSDG GVTPLHLAAL HGHAESLQLL
201: LDLGASVSEV TVNDGSTIDL IGSGSTALHY AACGGSAVCC QLLIAAGAHM GAENANGLSP LMVARSWHKT GAEGVLSKLP EGRLLILPSP YLSLPLMSIV
301: KIARECGWRK TSASSSSCHD PCVICLEMEC TVAAEGCDHE FCTKCALYLC STTSSSTCTR GVPGSISCPL CRHTIVSFVK LTGTTFLKEL PWTTSSLALC
401: AAGASTGSLR RQSDIRRLRS TSVHLGCSSF RSTGSGRLSS IKLNCGRLDE TLPCLVSCIR PDVRRSSSYR ERVGSRYTEF S

Best Arabidopsis Sequence Match ( AT5G07270.1 )
(BLAST)

001: MGNSFGCSAS GERLVSAARD GDFVEAKMLL DCNPCLAKYS TFGGLNSPLH FAAAKGHNEI VGLLLENGAD VNSRNYCGQT ALMQACRYGH WEVVQTLLLF
101: RCNVTRADYL AGRTALHFAA VNGHARCIRL VLADFLPSDK LNSLPETGVV TAKNKSEQSA LSKFVNKAAD GGITALHMAA LNGLFDCVQL LLDLEANVSA
201: VTFHYGTSMD MIGAGSTPLH YAACGGNLKC CQILLARGAR KMTLNCNGWL PIDIARMWSR HWLEPLLSPN SDVVIPAFPH SNYLSLPLLS ILNIAREFGL
301: QSATIGDEVD ICAVCLERTC TVAAEGCEHQ LCVRCALYLC SSSNVPSVTV GPPGSIPCPL CRHGITAFKR LPSSLTREMK LPMSLGFCAP CMLHTGDTTD
401: QSSPTCPPTE QRSSKTRAAS VSSDIFCPVT CSPFPSVNIP MCTCNEGTCP NFETHGTERH SEEHVESSPS RTTTEQEKIE EGQRLGKTTT CSSMFWGRRS
501: CSRENQCNSE INA

Arabidopsis Description

XBAT33XBAT33 [Source:UniProtKB/TrEMBL;Acc:A0A178U6J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.