Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02760 | Canola | cytosol | 90.94 | 91.3 |
| Bra020414.1-P | Field mustard | plastid | 90.16 | 90.69 |
| PGSC0003DMT400029191 | Potato | cytosol, mitochondrion, nucleus, plastid | 65.94 | 66.21 |
| KRH18952 | Soybean | cytosol, nucleus, plastid | 65.75 | 65.75 |
| Solyc07g006350.2.1 | Tomato | cytosol, nucleus, plastid | 65.94 | 65.18 |
| KRH02947 | Soybean | cytosol, nucleus, plastid | 64.57 | 64.31 |
| GSMUA_Achr3P04900_001 | Banana | nucleus | 60.04 | 63.67 |
| GSMUA_Achr4P02080_001 | Banana | nucleus | 62.01 | 62.75 |
| GSMUA_Achr1P10240_001 | Banana | nucleus | 54.13 | 61.94 |
| EES05937 | Sorghum | nucleus | 60.43 | 61.77 |
| TraesCS6A01G352300.1 | Wheat | cytosol | 58.86 | 59.8 |
| TraesCS6D01G335000.2 | Wheat | cytosol | 58.66 | 59.6 |
| TraesCS6B01G385200.1 | Wheat | cytosol | 58.66 | 59.48 |
| Os02t0791200-01 | Rice | mitochondrion | 60.24 | 57.63 |
| Zm00001d052057_P013 | Maize | cytosol, mitochondrion, nucleus, plasma membrane, plastid | 60.83 | 55.68 |
| HORVU7Hr1G029900.6 | Barley | cytosol | 51.57 | 55.04 |
| TraesCS7A01G145900.1 | Wheat | cytosol | 51.97 | 54.89 |
| TraesCS7D01G147400.1 | Wheat | cytosol | 51.77 | 54.68 |
| TraesCS7B01G048300.1 | Wheat | cytosol | 51.57 | 54.47 |
| OQU80200 | Sorghum | nucleus | 51.38 | 54.04 |
| Os08t0258200-02 | Rice | nucleus | 51.77 | 53.13 |
| Zm00001d050184_P010 | Maize | plasma membrane | 51.18 | 49.52 |
| AT5G07270.1 | Thale cress | cytosol | 46.85 | 46.39 |
| AT2G28840.1 | Thale cress | cytosol | 23.23 | 25.88 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:19.2.2.1.5.3.2 | Gene3D:3.30.40.10 | EntrezGene:835882 | UniProt:A0A178UH83 | ProteinID:AED96944.1 |
| ArrayExpress:AT5G57740 | EnsemblPlantsGene:AT5G57740 | RefSeq:AT5G57740 | TAIR:AT5G57740 | RefSeq:AT5G57740-TAIR-G | EnsemblPlants:AT5G57740.1 |
| TAIR:AT5G57740.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | ProteinID:BAB09592.1 | EMBL:BT011688 |
| EMBL:BT012272 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009791 | GO:GO:0009987 |
| GO:GO:0010311 | GO:GO:0010366 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 |
| GO:GO:0051865 | InterPro:IPR001841 | InterPro:IPR002110 | InterPro:IPR013083 | InterPro:IPR020683 | InterPro:IPR036770 |
| RefSeq:NP_200582.3 | ProteinID:OAO93045.1 | PFAM:PF12796 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR01415 | ScanProsite:PS00518 | PFscan:PS50088 | PFscan:PS50089 | PFscan:PS50297 | PANTHER:PTHR24128 |
| PANTHER:PTHR24128:SF22 | UniProt:Q6NLQ8 | SMART:SM00184 | SMART:SM00248 | SUPFAM:SSF48403 | SUPFAM:SSF57850 |
| UniParc:UPI00002537D9 | Symbol:XBAT32 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg |
Description
XBAT32XBAT32 [Source:UniProtKB/TrEMBL;Acc:A0A178UH83]
Coordinates
chr5:-:23394585..23397650
Molecular Weight (calculated)
54589.1 Da
IEP (calculated)
8.057
GRAVY (calculated)
-0.031
Length
508 amino acids
Sequence
(BLAST)
(BLAST)
001: MRFLSLVGNS FGCSASGERL VSAARDGDLQ EAKALLDYNP RLARYSTFGV RNSPLHYSAA QGHHEIVSLL VESGVDINLR NYRGQTALMQ ACQHGHWEVV
101: LILILFGANI HRSDYLNGGT ALHLAALNGH PRCIRILLSE YIPSVPNCWS LLKNKKTSVA GFDSSVLHEV INRAADGGIT PLHVAALNGH IETVQLLLDL
201: GASVTQVTVE DGTTIDLIGA GSTALHYASC GGNTQCCQLL ISKGACLAAV NSNGWTPMMV ARSWHRNWLE EILNPTTEQP QLHLPNVPSP FLCLPLMSIV
301: NIAQECGWRE NDCLTPCRDP CAVCLERKCT VAADGCAHEF CTNCALYLST TSITSSKTSN VTPGSVPCPL CRNGIVSFTK LPHTTATTRT STSSRTSISL
401: SFCTCSSDVL DTALLTNPHY SCKPVVSRTG SRTPQSARSS AFRSLSCRRF PPSLCLGGSD VDEPRSRLIG GSYSRSGVGF RRSTSQVEGK RSWFSALNHC
501: VTTGGSAC
101: LILILFGANI HRSDYLNGGT ALHLAALNGH PRCIRILLSE YIPSVPNCWS LLKNKKTSVA GFDSSVLHEV INRAADGGIT PLHVAALNGH IETVQLLLDL
201: GASVTQVTVE DGTTIDLIGA GSTALHYASC GGNTQCCQLL ISKGACLAAV NSNGWTPMMV ARSWHRNWLE EILNPTTEQP QLHLPNVPSP FLCLPLMSIV
301: NIAQECGWRE NDCLTPCRDP CAVCLERKCT VAADGCAHEF CTNCALYLST TSITSSKTSN VTPGSVPCPL CRNGIVSFTK LPHTTATTRT STSSRTSISL
401: SFCTCSSDVL DTALLTNPHY SCKPVVSRTG SRTPQSARSS AFRSLSCRRF PPSLCLGGSD VDEPRSRLIG GSYSRSGVGF RRSTSQVEGK RSWFSALNHC
501: VTTGGSAC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.