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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83303 Canola cytosol 91.67 91.87
CDY15789 Canola cytosol 91.67 91.67
CDY47891 Canola cytosol 91.45 91.65
Bra011923.1-P Field mustard nucleus 91.45 91.25
CDX95759 Canola cytosol 89.91 87.98
Bra035664.1-P Field mustard nucleus 85.31 86.25
CDX77214 Canola cytosol 83.77 84.33
Bra000480.1-P Field mustard plastid 89.69 82.96
CDY31737 Canola cytosol 84.65 80.92
VIT_06s0004g04550.t01 Wine grape nucleus 64.91 73.27
KRH29806 Soybean nucleus 69.52 70.92
KRH10274 Soybean nucleus 68.86 70.72
Solyc11g066020.1.1 Tomato nucleus 68.86 70.4
KRH23057 Soybean nucleus 69.3 70.07
KRH24806 Soybean nucleus 68.64 70.02
PGSC0003DMT400001171 Potato nucleus 68.42 69.96
PGSC0003DMT400077953 Potato nucleus 67.11 69.07
Solyc06g076050.2.1 Tomato nucleus 66.89 68.23
GSMUA_AchrUn_... Banana cytosol, mitochondrion, nucleus, plastid 65.57 67.95
GSMUA_Achr7P18180_001 Banana cytosol 64.04 66.21
Os05t0112000-01 Rice cytosol 64.25 65.11
GSMUA_Achr10P... Banana nucleus 61.18 63.7
TraesCS1D01G035300.1 Wheat cytosol 62.28 63.11
TraesCS1A01G034300.2 Wheat cytosol 61.4 62.08
EES18892 Sorghum nucleus 61.62 60.43
TraesCS4B01G207400.1 Wheat cytosol 57.89 59.06
TraesCS1B01G050200.3 Wheat cytosol 62.28 58.44
TraesCS4D01G208300.1 Wheat cytosol 57.46 57.96
TraesCS4A01G097000.2 Wheat cytosol 57.68 57.93
EER92481 Sorghum nucleus 56.58 57.59
Os03t0275300-01 Rice nucleus 58.33 57.2
TraesCS3D01G537900.1 Wheat cytosol 56.14 55.9
TraesCS3A01G532700.1 Wheat cytosol 56.58 55.84
Os01t0974400-01 Rice cytosol 54.39 55.61
TraesCS3B01G609500.1 Wheat cytosol 56.58 55.6
GSMUA_Achr6P33430_001 Banana nucleus 59.87 55.38
EES02150 Sorghum cytosol 56.58 53.31
TraesCS7D01G304700.1 Wheat cytosol 22.37 50.0
Zm00001d025843_P001 Maize plastid 22.37 49.51
HORVU1Hr1G043970.3 Barley plastid 23.9 38.52
AT5G07270.1 Thale cress cytosol 28.51 25.34
AT5G57740.1 Thale cress cytosol 25.88 23.23
Protein Annotations
Gene3D:1.25.40.20MapMan:19.2.2.1.5.3.2Gene3D:3.30.40.10EntrezGene:817433UniProt:A0A178VZ27ProteinID:AAC79588.1
ProteinID:AEC08179.1EMBL:AF370581EMBL:AF428301EMBL:AK222223ArrayExpress:AT2G28840EnsemblPlantsGene:AT2G28840
RefSeq:AT2G28840TAIR:AT2G28840RefSeq:AT2G28840-TAIR-GEnsemblPlants:AT2G28840.1TAIR:AT2G28840.1EMBL:AY042842
EMBL:AY081458InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfUnigene:At.21021EMBL:BT000727
ncoils:CoilEMBL:DQ086863GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567GO:GO:0016740
GO:GO:0019538GO:GO:0046872InterPro:IPR001841InterPro:IPR002110InterPro:IPR013083InterPro:IPR020683
InterPro:IPR036770RefSeq:NP_180450.2ProteinID:OAP11218.1PFAM:PF12796PFAM:PF13857PO:PO:0000013
PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025195PO:PO:0025281PFscan:PS50088PFscan:PS50089PFscan:PS50297
PANTHER:PTHR24128PANTHER:PTHR24128:SF14UniProt:Q94B55SMART:SM00248SUPFAM:SSF48403SUPFAM:SSF57850
UniParc:UPI00000AC328Symbol:XBAT31InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDSEG:seg:
Description
XBAT31Putative E3 ubiquitin-protein ligase XBAT31 [Source:UniProtKB/Swiss-Prot;Acc:Q94B55]
Coordinates
chr2:+:12378272..12380809
Molecular Weight (calculated)
49612.6 Da
IEP (calculated)
7.798
GRAVY (calculated)
-0.139
Length
456 amino acids
Sequence
(BLAST)
001: MGQSMSCGSR PEHGIFASVQ CGDIITIRRV MATEPSLLNQ TTPYDRHSVL HVAAANGQIE ILSLLLERFT NPDLLNRHKQ TPLMLAAMYG RISCVKKLAE
101: VGANILMFDS VNRRTCLHYA AYYGHANCVQ AILSAAQSSP VAVHWGYARF VNIRDDKGAT PLHLAARQRR PECVNVLLDS GSLVCASTSV YGSPGSTPLH
201: LAARSGSIDC VRKLLAWGAD RLQRDASGRI PYVVAMKHKH GACGALLNPS SAEPLVWPSP LKFISELNDE AKLLLEQALM EANREREKTI LKGTAYSLPS
301: PSFSDTDDNM SEVSDTELCC ICFEQVCTIE VKDCGHQMCA QCTLALCCHN KPNPTTSTVT PPVCPFCRST IACLVVAQNN NNNNEKSKSL DDVVVVDREA
401: GDVSSSKFRK HRRSINLGEE SSSFMGLSTI GSFGRITGRG SGRIAAENEL MDKPIL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.