Factsheet for Bra009278.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70022	Canola	cytosol	100.0	100.0
CDX98991	Canola	cytosol	97.86	98.05
AT5G07270.1	Thale cress	cytosol	91.84	92.2
VIT_16s0100g00690.t01	Wine grape	nucleus	76.31	76.76
PGSC0003DMT400037056	Potato	cytosol, nucleus, plastid	74.95	75.54
Solyc03g026060.2.1	Tomato	cytosol, nucleus, plastid	74.76	75.34
KRH38558	Soybean	nucleus	74.56	75.15
KRH09105	Soybean	nucleus	74.56	75.15
KRH35355	Soybean	nucleus	73.01	73.44
KRG91461	Soybean	cytosol, nucleus, plastid	73.01	73.44
GSMUA_Achr11P...	Banana	plastid	37.86	73.03
Os10t0521600-01	Rice	cytosol	31.84	67.77
GSMUA_Achr11P...	Banana	cytosol	63.11	63.11
TraesCS1A01G189100.1	Wheat	cytosol	62.72	62.12
TraesCS1B01G196800.1	Wheat	cytosol	62.72	62.12
TraesCS1D01G187300.1	Wheat	cytosol	62.72	62.12
HORVU1Hr1G048560.1	Barley	cytosol	62.52	61.92
EER92045	Sorghum	cytosol, nucleus, plastid	61.16	60.58
Zm00001d029663_P001	Maize	cytosol	60.58	60.0
GSMUA_Achr11P...	Banana	mitochondrion	28.93	51.38
Bra020414.1-P	Field mustard	plastid	45.63	46.53
Bra002699.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	46.02	46.02
Bra020415.1-P	Field mustard	mitochondrion	13.01	31.6
Bra011923.1-P	Field mustard	nucleus	25.63	28.88
Bra035664.1-P	Field mustard	nucleus	25.05	28.6
Bra000480.1-P	Field mustard	plastid	24.66	25.76

Protein Annotations

Gene3D:1.25.40.20	MapMan:19.2.2.1.5.3.2	Gene3D:3.30.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
EnsemblPlantsGene:Bra009278	EnsemblPlants:Bra009278.1	EnsemblPlants:Bra009278.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR001841	InterPro:IPR002110	InterPro:IPR013083
InterPro:IPR020683	InterPro:IPR036770	UniProt:M4CYI1	PFAM:PF00023	PFAM:PF12796	PFAM:PF13857
ScanProsite:PS00518	PFscan:PS50088	PFscan:PS50089	PFscan:PS50297	PANTHER:PTHR24128	PANTHER:PTHR24128:SF35
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF57850	UniParc:UPI000254379B	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
InterPro:Znf_RING_CS	SEG:seg	:	:	:	:

Description

AT5G07270 (E=7e-276) | ankyrin repeat family protein

Coordinates

chrA10:-:15953876..15956532

Molecular Weight (calculated)

55744.7 Da

IEP (calculated)

6.815

GRAVY (calculated)

-0.097

Length

515 amino acids

Sequence
(BLAST)

001: MGNSFGCSAS GERLVSAARD GDYVEAKMLL DCNPCLAKYS TFGGLNSPLH FAAAKGHNEI VGLLLEKGAD VNSRNYCGQT ALMQACRYGH WEVVQTLLLF
101: RCNVTRADYL AGRTALHFAA VNGHARCIRL VLADFVPSEQ RNPLPESGVV VTPRNKSEQS ALSKFVNKAA DGGITALHMA ALNGLFDCVQ LLLDLEANVS
201: AVTFHYGTSM DMIGAGSTPL HYAACGGNLK CCQILLARGA RKMTLNCNGW LPIDIARMWS RHWLEPLLSP NSDVVIPLFP RSSYLSLPLL SILNIAREFG
301: LQSTTISDEV DICAVCLERT CTVAAEGCEH QLCVRCALYL CSSSNVPSVT VDPPGSIPCP LCRHGIVSFK RLPSSLTKEL KLPMSLGFCA PCMLHTGDAR
401: DQSSPTTEQQ QQRSSKTRAA SVSSDMFCPV TCSPFPSVNI PLCTCSDGTC PNFETHGAER DGEEHDESSP PPRVATEQEK VDEGQRLGKT TTCSSMFWGR
501: RSCSRENQCN SEINA

Best Arabidopsis Sequence Match ( AT5G07270.1 )
(BLAST)

001: MGNSFGCSAS GERLVSAARD GDFVEAKMLL DCNPCLAKYS TFGGLNSPLH FAAAKGHNEI VGLLLENGAD VNSRNYCGQT ALMQACRYGH WEVVQTLLLF
101: RCNVTRADYL AGRTALHFAA VNGHARCIRL VLADFLPSDK LNSLPETGVV TAKNKSEQSA LSKFVNKAAD GGITALHMAA LNGLFDCVQL LLDLEANVSA
201: VTFHYGTSMD MIGAGSTPLH YAACGGNLKC CQILLARGAR KMTLNCNGWL PIDIARMWSR HWLEPLLSPN SDVVIPAFPH SNYLSLPLLS ILNIAREFGL
301: QSATIGDEVD ICAVCLERTC TVAAEGCEHQ LCVRCALYLC SSSNVPSVTV GPPGSIPCPL CRHGITAFKR LPSSLTREMK LPMSLGFCAP CMLHTGDTTD
401: QSSPTCPPTE QRSSKTRAAS VSSDIFCPVT CSPFPSVNIP MCTCNEGTCP NFETHGTERH SEEHVESSPS RTTTEQEKIE EGQRLGKTTT CSSMFWGRRS
501: CSRENQCNSE INA

Arabidopsis Description

XBAT33XBAT33 [Source:UniProtKB/TrEMBL;Acc:A0A178U6J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.