Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G290800.2 | Wheat | nucleus | 90.79 | 96.43 |
| TraesCS2D01G271900.2 | Wheat | nucleus | 90.79 | 96.43 |
| TraesCS2A01G272600.1 | Wheat | nucleus | 90.5 | 95.82 |
| Os04t0306800-01 | Rice | nucleus | 65.79 | 69.34 |
| VIT_04s0008g03030.t01 | Wine grape | cytosol, mitochondrion, nucleus | 10.38 | 37.77 |
| HORVU6Hr1G077700.12 | Barley | nucleus | 7.46 | 23.5 |
| HORVU7Hr1G050300.3 | Barley | nucleus | 18.86 | 18.59 |
| HORVU1Hr1G055400.2 | Barley | cytosol, golgi, nucleus | 6.29 | 18.53 |
| HORVU2Hr1G081930.1 | Barley | nucleus | 18.42 | 18.21 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G066510.2 | EnsemblPlantsGene:HORVU2Hr1G066510 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| PANTHER:PTHR45275 | PFAM:PF00076 | PFscan:PS50102 | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI000B4747C6 |
| UniProt:A0A287I9E4 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:460251741..460263589
Molecular Weight (calculated)
75549.8 Da
IEP (calculated)
9.488
GRAVY (calculated)
-0.704
Length
684 amino acids
Sequence
(BLAST)
(BLAST)
001: KKGHRLHARR LTLTHTVATG PSSRSKILTH GHCLFPKGGK MGQEADADEQ LQRRLRRVFA AEERSFRMDR RSPAAADLRS AVADVLPRFL GNYSDETLAE
101: YIVILVCNGK HQYQARDDLE AFLGDDSAKF VAWLWGYLSK TAVALADDSS VEHRLENESQ DRNDKKNLLV TKTQSGEAHI VNSNILVPQE HNGLHKLDLT
201: KGQNVAQRRI SSTVIISPKM LAGDECYWEG QHQKKDWSST GGRSSSMRQS GVAAKTEHTL MQEEPHDEHL GGNSSTRRFP VAVGTDDGEV PESMRRPRNV
301: WDRLGKPATE DQGLPTETDN MHVENIMHKK AKLMVSEHER RCLVNSSTEG DLFDRANSGN FSSSYPDVNT AHAHEPREKS NRSRLTGRLN FGDVERNRHQ
401: VGDVISQKST STLPVKSFGS QSLNEFTSEV KSSPASVSEP ARHANSLKGH VSASDKLSQL NMRLNSGTDV LQSQQISSPA QSKSGSSVRE DGVNYSNKPV
501: KDEMLDVKLK LKQVELDMLK LRSKQAQINN GKQGALPSGP HSNLEEDADA RTVLVTNVHF AATKEALSTH FMKCGTVLKL NMLTDAITGH PKGAAFVTFA
601: DKESIGRALS LSGTSFYSRV LTVMRKAEAP PGFLASIQQI GRPLPWNSPP FQKGVSPKQS SGHHLQWKRE QSVMENSPAN CPTD
101: YIVILVCNGK HQYQARDDLE AFLGDDSAKF VAWLWGYLSK TAVALADDSS VEHRLENESQ DRNDKKNLLV TKTQSGEAHI VNSNILVPQE HNGLHKLDLT
201: KGQNVAQRRI SSTVIISPKM LAGDECYWEG QHQKKDWSST GGRSSSMRQS GVAAKTEHTL MQEEPHDEHL GGNSSTRRFP VAVGTDDGEV PESMRRPRNV
301: WDRLGKPATE DQGLPTETDN MHVENIMHKK AKLMVSEHER RCLVNSSTEG DLFDRANSGN FSSSYPDVNT AHAHEPREKS NRSRLTGRLN FGDVERNRHQ
401: VGDVISQKST STLPVKSFGS QSLNEFTSEV KSSPASVSEP ARHANSLKGH VSASDKLSQL NMRLNSGTDV LQSQQISSPA QSKSGSSVRE DGVNYSNKPV
501: KDEMLDVKLK LKQVELDMLK LRSKQAQINN GKQGALPSGP HSNLEEDADA RTVLVTNVHF AATKEALSTH FMKCGTVLKL NMLTDAITGH PKGAAFVTFA
601: DKESIGRALS LSGTSFYSRV LTVMRKAEAP PGFLASIQQI GRPLPWNSPP FQKGVSPKQS SGHHLQWKRE QSVMENSPAN CPTD
001: MNEQLISVTA PIDDIEAPVS PKVEKMKMSR QELIDSPCTR ARRRKKENWN SSGYSRKVLR SVIVSATQQP CDRNPAKYEK SMNERSRTLK KRPYSPEREL
101: DSRFAPSGRA VSARYHDASL HQETEPHVSV WDRLGRASSE CVLDTESRTL SKFGIQTRET KVHQQHGPVF PAAYSEQHSE IFQREVLAVG YRHRVPQFDK
201: DRKPKSETIT STEPHIAYNL SRKRRYGMVS PNSGEFSYVP QYKQAEQDFE KPSLLSHQST KQDIFSEIKN VKEKMQELEL RIIQSKQLKK QKVEERKPSP
301: QSGESQYQED VSESRVIHVT NVYYAAKKEA ISMFFSSKCG AVQNVIVVTD PVTRHPKGTA FVTFATKESV GKAVALSGTM FYSRPIKVRM HVIASGVVSA
401: APQIVTGS
101: DSRFAPSGRA VSARYHDASL HQETEPHVSV WDRLGRASSE CVLDTESRTL SKFGIQTRET KVHQQHGPVF PAAYSEQHSE IFQREVLAVG YRHRVPQFDK
201: DRKPKSETIT STEPHIAYNL SRKRRYGMVS PNSGEFSYVP QYKQAEQDFE KPSLLSHQST KQDIFSEIKN VKEKMQELEL RIIQSKQLKK QKVEERKPSP
301: QSGESQYQED VSESRVIHVT NVYYAAKKEA ISMFFSSKCG AVQNVIVVTD PVTRHPKGTA FVTFATKESV GKAVALSGTM FYSRPIKVRM HVIASGVVSA
401: APQIVTGS
Arabidopsis Description
At2g24350 [Source:UniProtKB/TrEMBL;Acc:Q0WPW8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.