Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G290800.2 | Wheat | nucleus | 97.83 | 97.83 |
| TraesCS2A01G272600.1 | Wheat | nucleus | 97.52 | 97.21 |
| HORVU2Hr1G066510.2 | Barley | mitochondrion | 96.43 | 90.79 |
| Os04t0306800-01 | Rice | nucleus | 69.41 | 68.88 |
| VIT_04s0008g03030.t01 | Wine grape | cytosol, mitochondrion, nucleus | 11.18 | 38.3 |
| TraesCS7D01G179700.1 | Wheat | nucleus | 7.76 | 21.74 |
| TraesCS6D01G295600.1 | Wheat | nucleus | 7.14 | 20.72 |
| TraesCS1D01G218400.1 | Wheat | nucleus | 6.52 | 20.49 |
| TraesCS7D01G243800.1 | Wheat | nucleus | 20.5 | 18.97 |
| TraesCS2D01G332600.2 | Wheat | nucleus | 20.34 | 18.93 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G271900.2 | EnsemblPlantsGene:TraesCS2D01G271900 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom | PANTHER:PTHR45275 |
| PFAM:PF00076 | PFscan:PS50102 | SMART:SM00360 | SUPFAM:SSF54928 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2D:-:335680692..335690932
Molecular Weight (calculated)
71024.3 Da
IEP (calculated)
9.057
GRAVY (calculated)
-0.721
Length
644 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQEADADEQ LQRRLRRVFA AEERSFRMDR RSPAAADLRS AVADVLPRFL GNYSDETLAE YIVILVCNGK HQYQARDDLE AFLGDDSAKF VAWLWGYLSK
101: TAVALADDSS VQHRLENESQ DRNDKKNLLV TKTQPGEAHI VNSNILVPQE HNGLHKLDLT KGQNVAQRRI SSTVTISPKM VAGDECYREG QHQKKDWSST
201: AGRSSSVRQS GVAAKTEHTL MQEEPHDEHL GGNSSTRRLP VAVGTDDGEV PESMRRPRNV WDRLGKPAME DQGLATEADN MHVENIMHKK AKLMVSEHER
301: RCRVNSSTEG DLFDRVNSGN FSSSYPDVNT AHAHEPGEKS NRSRLTGRLN FGDVERNRHQ VRDVISQKST STPPVKSFGS QSLNEFISKV KSLPASASEP
401: ARHANSSKGH VSASDKLSQL NMRLNSGTDV LQSQQISSPA QSKSGSSVRE DGGNYSNKPV KDEMLDVKLK LKQVELDMLK LRSKQAQINN GKQGALPSGP
501: HSNLEEDADA RTVLVTNVHF AATKEALSTH FMKCGTVLKL NMLTDAITGH PKGAAFVTFA DKESIGRALS LSGTSFYSRV LTVMRKAEAP PGFLASIQQI
601: GRPLPWNSPP FQKGVSPKQS SGHHLQWKRE QSAMENSPAN CPTD
101: TAVALADDSS VQHRLENESQ DRNDKKNLLV TKTQPGEAHI VNSNILVPQE HNGLHKLDLT KGQNVAQRRI SSTVTISPKM VAGDECYREG QHQKKDWSST
201: AGRSSSVRQS GVAAKTEHTL MQEEPHDEHL GGNSSTRRLP VAVGTDDGEV PESMRRPRNV WDRLGKPAME DQGLATEADN MHVENIMHKK AKLMVSEHER
301: RCRVNSSTEG DLFDRVNSGN FSSSYPDVNT AHAHEPGEKS NRSRLTGRLN FGDVERNRHQ VRDVISQKST STPPVKSFGS QSLNEFISKV KSLPASASEP
401: ARHANSSKGH VSASDKLSQL NMRLNSGTDV LQSQQISSPA QSKSGSSVRE DGGNYSNKPV KDEMLDVKLK LKQVELDMLK LRSKQAQINN GKQGALPSGP
501: HSNLEEDADA RTVLVTNVHF AATKEALSTH FMKCGTVLKL NMLTDAITGH PKGAAFVTFA DKESIGRALS LSGTSFYSRV LTVMRKAEAP PGFLASIQQI
601: GRPLPWNSPP FQKGVSPKQS SGHHLQWKRE QSAMENSPAN CPTD
001: MNEQLISVTA PIDDIEAPVS PKVEKMKMSR QELIDSPCTR ARRRKKENWN SSGYSRKVLR SVIVSATQQP CDRNPAKYEK SMNERSRTLK KRPYSPEREL
101: DSRFAPSGRA VSARYHDASL HQETEPHVSV WDRLGRASSE CVLDTESRTL SKFGIQTRET KVHQQHGPVF PAAYSEQHSE IFQREVLAVG YRHRVPQFDK
201: DRKPKSETIT STEPHIAYNL SRKRRYGMVS PNSGEFSYVP QYKQAEQDFE KPSLLSHQST KQDIFSEIKN VKEKMQELEL RIIQSKQLKK QKVEERKPSP
301: QSGESQYQED VSESRVIHVT NVYYAAKKEA ISMFFSSKCG AVQNVIVVTD PVTRHPKGTA FVTFATKESV GKAVALSGTM FYSRPIKVRM HVIASGVVSA
401: APQIVTGS
101: DSRFAPSGRA VSARYHDASL HQETEPHVSV WDRLGRASSE CVLDTESRTL SKFGIQTRET KVHQQHGPVF PAAYSEQHSE IFQREVLAVG YRHRVPQFDK
201: DRKPKSETIT STEPHIAYNL SRKRRYGMVS PNSGEFSYVP QYKQAEQDFE KPSLLSHQST KQDIFSEIKN VKEKMQELEL RIIQSKQLKK QKVEERKPSP
301: QSGESQYQED VSESRVIHVT NVYYAAKKEA ISMFFSSKCG AVQNVIVVTD PVTRHPKGTA FVTFATKESV GKAVALSGTM FYSRPIKVRM HVIASGVVSA
401: APQIVTGS
Arabidopsis Description
At2g24350 [Source:UniProtKB/TrEMBL;Acc:Q0WPW8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.