Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G059480.1 | Barley | cytosol | 75.96 | 86.81 |
| HORVU4Hr1G052310.1 | Barley | cytosol, peroxisome | 77.88 | 80.2 |
| HORVU4Hr1G052280.1 | Barley | cytosol, peroxisome | 75.96 | 79.0 |
| HORVU7Hr1G046060.1 | Barley | mitochondrion | 51.92 | 72.97 |
| HORVU5Hr1G027630.1 | Barley | cytosol, mitochondrion, vacuole | 47.12 | 68.06 |
| Zm00001d023647_P001 | Maize | cytosol, mitochondrion | 45.19 | 39.5 |
| Os09t0544900-01 | Rice | cytosol | 69.23 | 22.86 |
| Zm00001d036800_P001 | Maize | peroxisome | 50.96 | 20.87 |
| HORVU5Hr1G085520.1 | Barley | mitochondrion | 77.88 | 20.45 |
| EER99285 | Sorghum | cytosol | 68.27 | 20.4 |
| VIT_18s0001g00490.t01 | Wine grape | cytosol, peroxisome, plastid | 55.77 | 18.95 |
| KRH51640 | Soybean | nucleus | 55.77 | 18.83 |
| CDX73237 | Canola | cytosol | 53.85 | 18.73 |
| Bra015782.1-P | Field mustard | cytosol | 53.85 | 18.73 |
| CDX87634 | Canola | cytosol | 52.88 | 18.39 |
| KRH60966 | Soybean | cytosol, nucleus, peroxisome | 54.81 | 18.15 |
| Solyc12g094450.1.1 | Tomato | cytosol | 51.92 | 17.42 |
| AT1G76150.1 | Thale cress | cytosol, nucleus, peroxisome | 50.96 | 17.15 |
| PGSC0003DMT400075400 | Potato | cytosol | 51.92 | 15.93 |
| GSMUA_Achr11P... | Banana | cytosol, golgi, peroxisome | 43.27 | 14.02 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G064680.2 | EnsemblPlantsGene:HORVU6Hr1G064680 | Gene3D:3.10.129.10 | InterPro:HotDog_dom_sf | InterPro:MaoC_dom | InterPro:Mfe-2 |
| PANTHER:PTHR13078 | PFAM:PF01575 | SUPFAM:SSF54637 | UniParc:UPI000B482EF3 | UniProt:A0A287UG31 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr6H:+:440887995..440888732
Molecular Weight (calculated)
12039.8 Da
IEP (calculated)
10.325
GRAVY (calculated)
-0.038
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: PSFRTFCRTK IQQIIKFTRP ILHDLYTLGF AARAVIKSFC NGDPAAMQNI FGRFLLHVYP GEMLVTEMWV NGQRVQYQTK VKERDRAVLS GYVLLKQHIP
101: SSFC
101: SSFC
001: MATSDSEFNS DLLLAHKLPE TRYTYNERDV AIYALGIGAC GQDAVDSDEL KFVYHRNGQD LIQVLPTFAS LFTLGSLTEG LDLPGFKYDP SLLLHGQQYI
101: EIYRPLPSKA SLINKVSLAG LQDKGKAAIL ELETRSYEEG SGELLCMNRT TVFLRGAGGF SNSSQPFSYK NYPSNQGLAV KIPQRQPLTV CEERTQPSQA
201: LLYRLSGDYN PLHSDPEFAK LAGFPRPILH GLCTLGFAIK AIIKCVCKGD PTAVKTISGR FLTTVFPGET LITEMWLEGL RVIYQTKVKE RNKTVLAGYV
301: DIRGLSSSL
101: EIYRPLPSKA SLINKVSLAG LQDKGKAAIL ELETRSYEEG SGELLCMNRT TVFLRGAGGF SNSSQPFSYK NYPSNQGLAV KIPQRQPLTV CEERTQPSQA
201: LLYRLSGDYN PLHSDPEFAK LAGFPRPILH GLCTLGFAIK AIIKCVCKGD PTAVKTISGR FLTTVFPGET LITEMWLEGL RVIYQTKVKE RNKTVLAGYV
301: DIRGLSSSL
Arabidopsis Description
ECH2Enoyl-CoA hydratase 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8VYI3]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.