Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87634 | Canola | cytosol | 88.35 | 91.3 |
| CDX73237 | Canola | cytosol | 88.03 | 90.97 |
| Bra015782.1-P | Field mustard | cytosol | 88.03 | 90.97 |
| KRH51640 | Soybean | nucleus | 70.55 | 70.78 |
| KRH60966 | Soybean | cytosol, nucleus, peroxisome | 69.58 | 68.47 |
| VIT_18s0001g00490.t01 | Wine grape | cytosol, peroxisome, plastid | 64.72 | 65.36 |
| Solyc12g094450.1.1 | Tomato | cytosol | 64.4 | 64.19 |
| HORVU2Hr1G059480.1 | Barley | cytosol | 17.8 | 60.44 |
| HORVU4Hr1G052280.1 | Barley | cytosol, peroxisome | 19.42 | 60.0 |
| HORVU5Hr1G027630.1 | Barley | cytosol, mitochondrion, vacuole | 13.92 | 59.72 |
| Os09t0544900-01 | Rice | cytosol | 60.19 | 59.05 |
| PGSC0003DMT400075400 | Potato | cytosol | 64.72 | 59.0 |
| Zm00001d006270_P001 | Maize | extracellular, mitochondrion | 62.14 | 58.9 |
| HORVU4Hr1G052310.1 | Barley | cytosol, peroxisome | 19.09 | 58.42 |
| Zm00001d021463_P001 | Maize | cytosol | 12.95 | 57.97 |
| KXG36107 | Sorghum | peroxisome | 59.55 | 57.68 |
| TraesCS5D01G346200.2 | Wheat | peroxisome | 61.16 | 57.62 |
| TraesCS5A01G341000.1 | Wheat | peroxisome | 60.52 | 57.54 |
| TraesCS5B01G339100.1 | Wheat | peroxisome | 60.52 | 57.01 |
| GSMUA_Achr11P... | Banana | cytosol, golgi, peroxisome | 57.61 | 55.45 |
| EER99285 | Sorghum | cytosol | 62.14 | 55.17 |
| Zm00001d021462_P001 | Maize | cytosol, peroxisome, plastid | 33.66 | 51.49 |
| HORVU7Hr1G046060.1 | Barley | mitochondrion | 12.3 | 51.35 |
| HORVU6Hr1G064680.2 | Barley | mitochondrion | 17.15 | 50.96 |
| HORVU5Hr1G085520.1 | Barley | mitochondrion | 60.84 | 47.47 |
| Zm00001d020860_P001 | Maize | cytosol, peroxisome, plastid | 17.48 | 45.38 |
| Zm00001d053054_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 14.24 | 41.9 |
| Zm00001d023647_P001 | Maize | cytosol, mitochondrion | 15.86 | 41.18 |
| Zm00001d036800_P001 | Maize | peroxisome | 24.92 | 30.32 |
Protein Annotations
| Gene3D:3.10.129.10 | MapMan:5.7.3.3.1 | EntrezGene:843947 | ProteinID:AAF17647.1 | ProteinID:AEE35803.1 | ArrayExpress:AT1G76150 |
| EnsemblPlantsGene:AT1G76150 | RefSeq:AT1G76150 | TAIR:AT1G76150 | RefSeq:AT1G76150-TAIR-G | EnsemblPlants:AT1G76150.1 | TAIR:AT1G76150.1 |
| EMBL:AY070763 | EMBL:AY093712 | Unigene:At.16593 | Symbol:ECH2 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0006629 |
| GO:GO:0006631 | GO:GO:0006635 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016491 | GO:GO:0016829 | GO:GO:0033542 | GO:GO:0055114 | GO:GO:0080023 | InterPro:HotDog_dom_sf |
| InterPro:MaoC_dom | InterPro:Mfe-2 | RefSeq:NP_177742.2 | PFAM:PF01575 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR13078 | UniProt:Q8VYI3 |
| SUPFAM:SSF54637 | UniParc:UPI00000A5E16 | : | : | : | : |
Description
ECH2Enoyl-CoA hydratase 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8VYI3]
Coordinates
chr1:-:28574740..28577700
Molecular Weight (calculated)
34084.0 Da
IEP (calculated)
7.416
GRAVY (calculated)
-0.144
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSDSEFNS DLLLAHKLPE TRYTYNERDV AIYALGIGAC GQDAVDSDEL KFVYHRNGQD LIQVLPTFAS LFTLGSLTEG LDLPGFKYDP SLLLHGQQYI
101: EIYRPLPSKA SLINKVSLAG LQDKGKAAIL ELETRSYEEG SGELLCMNRT TVFLRGAGGF SNSSQPFSYK NYPSNQGLAV KIPQRQPLTV CEERTQPSQA
201: LLYRLSGDYN PLHSDPEFAK LAGFPRPILH GLCTLGFAIK AIIKCVCKGD PTAVKTISGR FLTTVFPGET LITEMWLEGL RVIYQTKVKE RNKTVLAGYV
301: DIRGLSSSL
101: EIYRPLPSKA SLINKVSLAG LQDKGKAAIL ELETRSYEEG SGELLCMNRT TVFLRGAGGF SNSSQPFSYK NYPSNQGLAV KIPQRQPLTV CEERTQPSQA
201: LLYRLSGDYN PLHSDPEFAK LAGFPRPILH GLCTLGFAIK AIIKCVCKGD PTAVKTISGR FLTTVFPGET LITEMWLEGL RVIYQTKVKE RNKTVLAGYV
301: DIRGLSSSL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.