CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51640	Soybean	nucleus	93.31	95.13
VIT_18s0001g00490.t01	Wine grape	cytosol, peroxisome, plastid	69.43	71.24
CDX87634	Canola	cytosol	67.83	71.24
Bra015782.1-P	Field mustard	cytosol	66.88	70.23
CDX73237	Canola	cytosol	66.56	69.9
AT1G76150.1	Thale cress	cytosol, nucleus, peroxisome	68.47	69.58
Solyc12g094450.1.1	Tomato	cytosol	65.61	66.45
HORVU2Hr1G059480.1	Barley	cytosol	18.79	64.84
PGSC0003DMT400075400	Potato	cytosol	66.24	61.36
HORVU4Hr1G052280.1	Barley	cytosol, peroxisome	19.43	61.0
Zm00001d021463_P001	Maize	cytosol	13.38	60.87
Os09t0544900-01	Rice	cytosol	60.83	60.63
TraesCS5D01G346200.2	Wheat	peroxisome	62.1	59.45
HORVU4Hr1G052310.1	Barley	cytosol, peroxisome	19.11	59.41
TraesCS5A01G341000.1	Wheat	peroxisome	61.15	59.08
TraesCS5B01G339100.1	Wheat	peroxisome	61.47	58.84
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	59.55	58.26
KXG36107	Sorghum	peroxisome	58.28	57.37
Zm00001d006270_P001	Maize	extracellular, mitochondrion	59.24	57.06
HORVU5Hr1G027630.1	Barley	cytosol, mitochondrion, vacuole	13.06	56.94
HORVU6Hr1G064680.2	Barley	mitochondrion	18.15	54.81
HORVU7Hr1G046060.1	Barley	mitochondrion	12.74	54.05
EER99285	Sorghum	cytosol	59.55	53.74
Zm00001d021462_P001	Maize	cytosol, peroxisome, plastid	33.76	52.48
Zm00001d020860_P001	Maize	cytosol, peroxisome, plastid	19.11	50.42
HORVU5Hr1G085520.1	Barley	mitochondrion	62.1	49.24
Zm00001d053054_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	15.61	46.67
Zm00001d023647_P001	Maize	cytosol, mitochondrion	14.65	38.66
Zm00001d036800_P001	Maize	peroxisome	25.16	31.1

Protein Annotations

EMBL:ACUP02002143	EnsemblPlants:KRH60966	EnsemblPlantsGene:GLYMA_04G019600	EntrezGene:100819304	Gene3D:3.10.129.10	InterPro:HotDog_dom_sf
InterPro:MaoC_dom	InterPro:Mfe-2	PANTHER:PTHR13078	PFAM:PF01575	ProteinID:KRH60966	ProteinID:KRH60966.1
SUPFAM:SSF54637	UniParc:UPI0003DED271	UniProt:A0A0R0K2F5	MapMan:5.7.3.3.1	:	:

Description

hypothetical protein

Coordinates

chr4:+:1534789..1539142

Molecular Weight (calculated)

34574.7 Da

IEP (calculated)

8.704

GRAVY (calculated)

-0.086

Length

314 amino acids

Sequence
(BLAST)

001: MASASEFDPA LALSHKFPDT TYSYTERDAA LYALGVGVCL SDAVDGVELK YVYHENGQGS IKVLPTFATL LVLRSGASGY NLPGLEYDPR LLLHGQQYIE
101: LYKPLPSSCH IHNIVSLAGL HDKGKAAILE IETKSYEKES GDLLCMNRTT VFLRGAGGFS KSSKPFSYTN YPMNQNPAVK IPESKPFSVF EDRTQPSQAL
201: LYRLSGDYNP LHSDPMVAKV AGSWGVLRFS QPILHGLCTL GFAVRAIIKC ICRGDPDLIK SVAGRFLLHV YPGETLVTEM WLEGSRVIYR TKVKERKRTV
301: LSGYVGLRGL TSSL

Best Arabidopsis Sequence Match ( AT1G76150.1 )
(BLAST)

001: MATSDSEFNS DLLLAHKLPE TRYTYNERDV AIYALGIGAC GQDAVDSDEL KFVYHRNGQD LIQVLPTFAS LFTLGSLTEG LDLPGFKYDP SLLLHGQQYI
101: EIYRPLPSKA SLINKVSLAG LQDKGKAAIL ELETRSYEEG SGELLCMNRT TVFLRGAGGF SNSSQPFSYK NYPSNQGLAV KIPQRQPLTV CEERTQPSQA
201: LLYRLSGDYN PLHSDPEFAK LAGFPRPILH GLCTLGFAIK AIIKCVCKGD PTAVKTISGR FLTTVFPGET LITEMWLEGL RVIYQTKVKE RNKTVLAGYV
301: DIRGLSSSL

Arabidopsis Description

ECH2Enoyl-CoA hydratase 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8VYI3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.