Factsheet for Zm00001d006270_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99285	Sorghum	cytosol	93.56	87.64
Os09t0544900-01	Rice	cytosol	81.29	84.13
Zm00001d021463_P001	Maize	cytosol	14.72	69.57
CDX73237	Canola	cytosol	58.9	64.21
Bra015782.1-P	Field mustard	cytosol	58.59	63.88
CDX87634	Canola	cytosol	57.36	62.54
AT1G76150.1	Thale cress	cytosol, nucleus, peroxisome	58.9	62.14
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	59.82	60.75
VIT_18s0001g00490.t01	Wine grape	cytosol, peroxisome, plastid	56.75	60.46
KRH51640	Soybean	nucleus	57.06	60.39
Solyc12g094450.1.1	Tomato	cytosol	57.36	60.32
KRH60966	Soybean	cytosol, nucleus, peroxisome	57.06	59.24
Zm00001d021462_P001	Maize	cytosol, peroxisome, plastid	35.28	56.93
Zm00001d020860_P001	Maize	cytosol, peroxisome, plastid	20.55	56.3
Zm00001d053054_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	17.79	55.24
PGSC0003DMT400075400	Potato	cytosol	57.36	55.16
Zm00001d023647_P001	Maize	cytosol, mitochondrion	19.94	54.62
Zm00001d036800_P001	Maize	peroxisome	29.75	38.19

Protein Annotations

EnsemblPlants:Zm00001d006270_P001	EnsemblPlants:Zm00001d006270_T001	EnsemblPlantsGene:Zm00001d006270	EntrezGene:100272552	Gene3D:3.10.129.10	InterPro:HotDog_dom_sf
InterPro:MaoC_dom	InterPro:Mfe-2	PANTHER:PTHR13078	PFAM:PF01575	ProteinID:ONM23252.1	SUPFAM:SSF54637
UniParc:UPI0004DE873F	UniProt:A0A1D6EU99	MapMan:5.7.3.3.1	:	:	:

Description

Enoyl-CoA hydratase 2 peroxisomal

Coordinates

chr2:-:203313532..203322132

Molecular Weight (calculated)

35812.6 Da

IEP (calculated)

6.736

GRAVY (calculated)

-0.194

Length

326 amino acids

Sequence
(BLAST)

001: MATSSKPAAP VDPMVVLAHE FPEVSFDYDE RDVALYALGV GACGDDAVDE KELHFVYHRD GQPHIKTLPT FVSLFPNKNS NGLGFVDVPG LNFDASLLLH
101: GQQYIEIYRP IPSYASVVNR VKVAGLHDKG KATILELETT TSLKESGEIL CMNRSTIYLR GAGGFSDSSR PYSYATYPAN QVSRISIPNS APSAVCDDQT
201: KQSQALLYRL SGDYNPLHSD PDIAQLAGFT RPILHGLCTL GFAARAVIKS FCNGEPTAVK SIFGRFLLHV YPGETLSTEM WLDGQKVHYQ TKAKERNRAV
301: LSGYVLLQHI PSSLMDDKIK DNKVVQ

Best Arabidopsis Sequence Match ( AT1G76150.1 )
(BLAST)

001: MATSDSEFNS DLLLAHKLPE TRYTYNERDV AIYALGIGAC GQDAVDSDEL KFVYHRNGQD LIQVLPTFAS LFTLGSLTEG LDLPGFKYDP SLLLHGQQYI
101: EIYRPLPSKA SLINKVSLAG LQDKGKAAIL ELETRSYEEG SGELLCMNRT TVFLRGAGGF SNSSQPFSYK NYPSNQGLAV KIPQRQPLTV CEERTQPSQA
201: LLYRLSGDYN PLHSDPEFAK LAGFPRPILH GLCTLGFAIK AIIKCVCKGD PTAVKTISGR FLTTVFPGET LITEMWLEGL RVIYQTKVKE RNKTVLAGYV
301: DIRGLSSSL

Arabidopsis Description

ECH2Enoyl-CoA hydratase 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8VYI3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.