Factsheet for PGSC0003DMT400075400

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g094450.1.1	Tomato	cytosol	88.2	96.45
VIT_18s0001g00490.t01	Wine grape	cytosol, peroxisome, plastid	62.83	69.61
KRH51640	Soybean	nucleus	61.36	67.53
KRH60966	Soybean	cytosol, nucleus, peroxisome	61.36	66.24
CDX73237	Canola	cytosol	58.11	65.89
Bra015782.1-P	Field mustard	cytosol	57.82	65.55
CDX87634	Canola	cytosol	57.82	65.55
AT1G76150.1	Thale cress	cytosol, nucleus, peroxisome	59.0	64.72
Os09t0544900-01	Rice	cytosol	57.82	62.22
HORVU2Hr1G059480.1	Barley	cytosol	16.22	60.44
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	55.16	58.26
HORVU4Hr1G052280.1	Barley	cytosol, peroxisome	17.11	58.0
Zm00001d006270_P001	Maize	extracellular, mitochondrion	55.16	57.36
HORVU4Hr1G052310.1	Barley	cytosol, peroxisome	16.81	56.44
KXG36107	Sorghum	peroxisome	53.1	56.43
TraesCS5D01G346200.2	Wheat	peroxisome	54.28	56.1
TraesCS5A01G341000.1	Wheat	peroxisome	53.69	56.0
TraesCS5B01G339100.1	Wheat	peroxisome	53.98	55.79
Zm00001d021463_P001	Maize	cytosol	11.21	55.07
EER99285	Sorghum	cytosol	56.34	54.89
HORVU5Hr1G027630.1	Barley	cytosol, mitochondrion, vacuole	11.21	52.78
Zm00001d021462_P001	Maize	cytosol, peroxisome, plastid	31.27	52.48
HORVU6Hr1G064680.2	Barley	mitochondrion	15.93	51.92
HORVU7Hr1G046060.1	Barley	mitochondrion	11.21	51.35
Zm00001d020860_P001	Maize	cytosol, peroxisome, plastid	17.7	50.42
Zm00001d053054_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	15.04	48.57
HORVU5Hr1G085520.1	Barley	mitochondrion	55.16	47.22
Zm00001d023647_P001	Maize	cytosol, mitochondrion	13.86	39.5
Zm00001d036800_P001	Maize	peroxisome	22.71	30.32

Protein Annotations

EntrezGene:102584477	Gene3D:3.10.129.10	MapMan:5.7.3.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0033542	GO:GO:0080023	InterPro:HotDog_dom_sf
UniProt:M1CV39	InterPro:MaoC_dom	InterPro:Mfe-2	PFAM:PF01575	EnsemblPlantsGene:PGSC0003DMG400029326	PGSC:PGSC0003DMG400029326
EnsemblPlants:PGSC0003DMT400075400	PANTHER:PTHR13078	SUPFAM:SSF54637	UniParc:UPI0002964476	SEG:seg	:

Description

Estradiol 17 beta-dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400029326]

Coordinates

chr12:-:57269116..57273405

Molecular Weight (calculated)

37816.5 Da

IEP (calculated)

8.198

GRAVY (calculated)

-0.136

Length

339 amino acids

Sequence
(BLAST)

001: MAGSGNSGID PELVISHKFP ESLHTYTERD AAIYALGVGA CTKDAIDDKE LKYVYHQDGQ EFIQVLPTFS TLFTVGIPSQ MEQLPGLPFD PRLLLHGQQY
101: IEVYKPLPSH GCILNKTSIA GLHDKGKAAV LEVEIVSYEK ESGERLCMNR LSIYLRGAGG FSKSSQPYSY SSNHSNQSAF PKIPKSQPFA VYEECTHASQ
201: ALLYRLSGDY NPLHSDPKFA ESAGFSRPIL HGLCTLGFAV RTIIKCICGG DQNTIKSVSG RFLLHVYPGE TLITEMWLEG LRYVKLVRPL PYDSFYLSVF
301: SRLKRPVAMC RVIYQVKVKE RNRAVLFGFV DLDRLSSSL

Best Arabidopsis Sequence Match ( AT1G76150.1 )
(BLAST)

001: MATSDSEFNS DLLLAHKLPE TRYTYNERDV AIYALGIGAC GQDAVDSDEL KFVYHRNGQD LIQVLPTFAS LFTLGSLTEG LDLPGFKYDP SLLLHGQQYI
101: EIYRPLPSKA SLINKVSLAG LQDKGKAAIL ELETRSYEEG SGELLCMNRT TVFLRGAGGF SNSSQPFSYK NYPSNQGLAV KIPQRQPLTV CEERTQPSQA
201: LLYRLSGDYN PLHSDPEFAK LAGFPRPILH GLCTLGFAIK AIIKCVCKGD PTAVKTISGR FLTTVFPGET LITEMWLEGL RVIYQTKVKE RNKTVLAGYV
301: DIRGLSSSL

Arabidopsis Description

ECH2Enoyl-CoA hydratase 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8VYI3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.