Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G346200.2 | Wheat | peroxisome | 96.65 | 96.65 |
| TraesCS5A01G341000.1 | Wheat | peroxisome | 91.77 | 92.62 |
| Os09t0544900-01 | Rice | cytosol | 79.88 | 83.17 |
| EER99285 | Sorghum | cytosol | 79.57 | 75.0 |
| HORVU5Hr1G085520.1 | Barley | mitochondrion | 90.55 | 75.0 |
| KRH51640 | Soybean | nucleus | 59.45 | 63.31 |
| Bra015782.1-P | Field mustard | cytosol | 57.62 | 63.21 |
| CDX73237 | Canola | cytosol | 57.62 | 63.21 |
| CDX87634 | Canola | cytosol | 56.4 | 61.87 |
| KRH60966 | Soybean | cytosol, nucleus, peroxisome | 58.84 | 61.47 |
| AT1G76150.1 | Thale cress | cytosol, nucleus, peroxisome | 57.01 | 60.52 |
| VIT_18s0001g00490.t01 | Wine grape | cytosol, peroxisome, plastid | 56.4 | 60.46 |
| GSMUA_Achr11P... | Banana | cytosol, golgi, peroxisome | 58.54 | 59.81 |
| Solyc12g094450.1.1 | Tomato | cytosol | 55.79 | 59.03 |
| PGSC0003DMT400075400 | Potato | cytosol | 55.79 | 53.98 |
| Zm00001d023647_P001 | Maize | cytosol, mitochondrion | 17.07 | 47.06 |
| Zm00001d036800_P001 | Maize | peroxisome | 25.3 | 32.68 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G339100.1 | EnsemblPlantsGene:TraesCS5B01G339100 | Gene3D:3.10.129.10 | InterPro:HotDog_dom_sf | InterPro:MaoC_dom | InterPro:Mfe-2 |
| PANTHER:PTHR13078 | PFAM:PF01575 | PFAM:PF13452 | SUPFAM:SSF54637 | TIGR:cd03448 | MapMan:5.7.3.3.1 |
Description
No Description!
Coordinates
chr5B:+:523195652..523202688
Molecular Weight (calculated)
35700.5 Da
IEP (calculated)
8.222
GRAVY (calculated)
-0.197
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MATNGRPAAS VDPDVALAYK FPEASFAYDE RDVALYALGV GACGADAVDD KELHLVHHRD GQRHIKAIPT FVSLFPNKNS NGRGIINVPG IHFDASLLLH
101: GQQYIEIYKP IPSCASVVNK VKVAGLHDKG KATILEIETT TSLKDSGEVL CMNRSTIFLR GAGGFSDSSR PYSYTTYPAN QISRISIPNS TPSAVYEDQT
201: QQSQALLYRL SGDYNPLHSD PMVAQVAGFT RPILHGLCTL GFAARAVIKS FCHGDPAAVR NIFGRFLLHV YPGETLVTEM WVDGQRVQYQ TKAKERDRAV
301: LSGYVLLKHI PSSLHGRSSD AENGGGRL
101: GQQYIEIYKP IPSCASVVNK VKVAGLHDKG KATILEIETT TSLKDSGEVL CMNRSTIFLR GAGGFSDSSR PYSYTTYPAN QISRISIPNS TPSAVYEDQT
201: QQSQALLYRL SGDYNPLHSD PMVAQVAGFT RPILHGLCTL GFAARAVIKS FCHGDPAAVR NIFGRFLLHV YPGETLVTEM WVDGQRVQYQ TKAKERDRAV
301: LSGYVLLKHI PSSLHGRSSD AENGGGRL
001: MATSDSEFNS DLLLAHKLPE TRYTYNERDV AIYALGIGAC GQDAVDSDEL KFVYHRNGQD LIQVLPTFAS LFTLGSLTEG LDLPGFKYDP SLLLHGQQYI
101: EIYRPLPSKA SLINKVSLAG LQDKGKAAIL ELETRSYEEG SGELLCMNRT TVFLRGAGGF SNSSQPFSYK NYPSNQGLAV KIPQRQPLTV CEERTQPSQA
201: LLYRLSGDYN PLHSDPEFAK LAGFPRPILH GLCTLGFAIK AIIKCVCKGD PTAVKTISGR FLTTVFPGET LITEMWLEGL RVIYQTKVKE RNKTVLAGYV
301: DIRGLSSSL
101: EIYRPLPSKA SLINKVSLAG LQDKGKAAIL ELETRSYEEG SGELLCMNRT TVFLRGAGGF SNSSQPFSYK NYPSNQGLAV KIPQRQPLTV CEERTQPSQA
201: LLYRLSGDYN PLHSDPEFAK LAGFPRPILH GLCTLGFAIK AIIKCVCKGD PTAVKTISGR FLTTVFPGET LITEMWLEGL RVIYQTKVKE RNKTVLAGYV
301: DIRGLSSSL
Arabidopsis Description
ECH2Enoyl-CoA hydratase 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8VYI3]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.