CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006270_P001	Maize	extracellular, mitochondrion	87.64	93.56
Os09t0544900-01	Rice	cytosol	75.86	83.81
TraesCS5A01G341000.1	Wheat	peroxisome	75.0	80.31
TraesCS5D01G346200.2	Wheat	peroxisome	75.57	80.18
TraesCS5B01G339100.1	Wheat	peroxisome	75.0	79.57
HORVU2Hr1G059480.1	Barley	cytosol	20.69	79.12
HORVU4Hr1G052280.1	Barley	cytosol, peroxisome	21.26	74.0
HORVU4Hr1G052310.1	Barley	cytosol, peroxisome	20.98	72.28
HORVU5Hr1G027630.1	Barley	cytosol, mitochondrion, vacuole	14.66	70.83
HORVU6Hr1G064680.2	Barley	mitochondrion	20.4	68.27
HORVU7Hr1G046060.1	Barley	mitochondrion	14.37	67.57
KXG36107	Sorghum	peroxisome	60.63	66.14
HORVU5Hr1G085520.1	Barley	mitochondrion	74.14	65.15
CDX73237	Canola	cytosol	55.46	64.55
Bra015782.1-P	Field mustard	cytosol	55.17	64.21
CDX87634	Canola	cytosol	54.31	63.21
AT1G76150.1	Thale cress	cytosol, nucleus, peroxisome	55.17	62.14
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	57.18	61.99
Solyc12g094450.1.1	Tomato	cytosol	54.89	61.61
VIT_18s0001g00490.t01	Wine grape	cytosol, peroxisome, plastid	53.45	60.78
KRH51640	Soybean	nucleus	53.74	60.71
KRH60966	Soybean	cytosol, nucleus, peroxisome	53.74	59.55
PGSC0003DMT400075400	Potato	cytosol	54.89	56.34

Protein Annotations

Gene3D:3.10.129.10	MapMan:5.7.3.3.1	UniProt:C5X6Y8	EnsemblPlants:EER99285	ProteinID:EER99285	ProteinID:EER99285.2
GO:GO:0003674	GO:GO:0003824	GO:GO:0004586	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0033387
InterPro:HotDog_dom_sf	InterPro:MaoC_dom	InterPro:Mfe-2	PFAM:PF01575	PFAM:PF13452	PANTHER:PTHR13078
EnsemblPlantsGene:SORBI_3002G284200	SUPFAM:SSF54637	UniParc:UPI00081ADB83	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:66495040..66506907

Molecular Weight (calculated)

37995.8 Da

IEP (calculated)

6.372

GRAVY (calculated)

-0.275

Length

348 amino acids

Sequence
(BLAST)

001: MATSSKPAAP VDPKFVLAHK FPEVSFDYDE RDVALYALGV GACGDDAVDE KELHFVYHRD GQPNIKVLPT FVSLFPNKNS NGLGFVDVPG LNFDASLLLH
101: GQQYIEIYRP IPSYASVVNR VKVAGLHDKG KATVLELETT TSLKESGEIL CMNRSTIYLR GAGGFSDSSR PYSYATYPAN QVSRISIPNS APSAVYDDQA
201: KQSQALLYRL SGDYNPLHSD PDIAQLAGFT RPILHGLCTL GFAARAVIKS FCNGEPTAVK SIFGRFLLHV YPGETLSTEM WLDGQKVHYQ TKVKERNRAV
301: LSGYVLLQHI PSSLAETEDR RSVHDVEPTG CGANDEETGG GDARGQHV

Best Arabidopsis Sequence Match ( AT1G76150.1 )
(BLAST)

001: MATSDSEFNS DLLLAHKLPE TRYTYNERDV AIYALGIGAC GQDAVDSDEL KFVYHRNGQD LIQVLPTFAS LFTLGSLTEG LDLPGFKYDP SLLLHGQQYI
101: EIYRPLPSKA SLINKVSLAG LQDKGKAAIL ELETRSYEEG SGELLCMNRT TVFLRGAGGF SNSSQPFSYK NYPSNQGLAV KIPQRQPLTV CEERTQPSQA
201: LLYRLSGDYN PLHSDPEFAK LAGFPRPILH GLCTLGFAIK AIIKCVCKGD PTAVKTISGR FLTTVFPGET LITEMWLEGL RVIYQTKVKE RNKTVLAGYV
301: DIRGLSSSL

Arabidopsis Description

ECH2Enoyl-CoA hydratase 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8VYI3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.