CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73237	Canola	cytosol	94.31	94.31
AT1G76150.1	Thale cress	cytosol, nucleus, peroxisome	91.3	88.35
KRH51640	Soybean	nucleus	72.58	70.45
KRH60966	Soybean	cytosol, nucleus, peroxisome	71.24	67.83
VIT_18s0001g00490.t01	Wine grape	cytosol, peroxisome, plastid	65.22	63.73
Solyc12g094450.1.1	Tomato	cytosol	65.22	62.9
HORVU2Hr1G059480.1	Barley	cytosol	19.06	62.64
HORVU4Hr1G052280.1	Barley	cytosol, peroxisome	20.4	61.0
Zm00001d021463_P001	Maize	cytosol	13.71	59.42
HORVU4Hr1G052310.1	Barley	cytosol, peroxisome	20.07	59.41
Os09t0544900-01	Rice	cytosol	61.54	58.41
HORVU5Hr1G027630.1	Barley	cytosol, mitochondrion, vacuole	14.05	58.33
PGSC0003DMT400075400	Potato	cytosol	65.55	57.82
Zm00001d006270_P001	Maize	extracellular, mitochondrion	62.54	57.36
TraesCS5D01G346200.2	Wheat	peroxisome	62.54	57.01
TraesCS5A01G341000.1	Wheat	peroxisome	61.87	56.92
TraesCS5B01G339100.1	Wheat	peroxisome	61.87	56.4
KXG36107	Sorghum	peroxisome	58.53	54.86
EER99285	Sorghum	cytosol	63.21	54.31
GSMUA_Achr11P...	Banana	cytosol, golgi, peroxisome	56.86	52.96
HORVU6Hr1G064680.2	Barley	mitochondrion	18.39	52.88
HORVU7Hr1G046060.1	Barley	mitochondrion	12.71	51.35
Zm00001d021462_P001	Maize	cytosol, peroxisome, plastid	32.78	48.51
HORVU5Hr1G085520.1	Barley	mitochondrion	62.54	47.22
Zm00001d020860_P001	Maize	cytosol, peroxisome, plastid	18.73	47.06
Zm00001d053054_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	15.72	44.76
Zm00001d023647_P001	Maize	cytosol, mitochondrion	15.72	39.5
Zm00001d036800_P001	Maize	peroxisome	25.75	30.32

Protein Annotations

EnsemblPlants:CDX87634	EnsemblPlantsGene:GSBRNA2T00146640001	Gene3D:3.10.129.10	InterPro:HotDog_dom_sf	InterPro:MaoC_dom	InterPro:Mfe-2
PANTHER:PTHR13078	PFAM:PF01575	PFAM:PF13452	ProteinID:CDX87634	ProteinID:CDX87634.1	SEG:seg
SUPFAM:SSF54637	UniParc:UPI0004EDBB93	MapMan:5.7.3.3.1	:	:	:

Description

BnaA07g32390D

Coordinates

chrLK031850:+:1538717..1541061

Molecular Weight (calculated)

32766.4 Da

IEP (calculated)

7.884

GRAVY (calculated)

-0.125

Length

299 amino acids

Sequence
(BLAST)

001: MTTSDSEFNP DLLLAHKLPE THYTYNERDV AIYALGVGAC NQDAVDSDEL KFVYHENGQE QIQVLPTFAS LLTLGSLSNG LDLPGFKYDP SLLLHGQQYI
101: EIYRPLPSKA SLINKVSLAG LQDKGKAAIL EIETRSYEQG SDELLCMNRT TVFLRGAGGF SNSSKPFSYK NYPSNQGLAV KIPQTQPSAA LLYRLSGDYN
201: PLHSDPNVAK LAGFPRPILH GLCTLGFAIK AIIKCICKGD PSAVKTISGR FLATVFPGET LITEMWLQGL RVIYQTKVKE RNKAVLSGYV DIRGLSSSL

Best Arabidopsis Sequence Match ( AT1G76150.1 )
(BLAST)

001: MATSDSEFNS DLLLAHKLPE TRYTYNERDV AIYALGIGAC GQDAVDSDEL KFVYHRNGQD LIQVLPTFAS LFTLGSLTEG LDLPGFKYDP SLLLHGQQYI
101: EIYRPLPSKA SLINKVSLAG LQDKGKAAIL ELETRSYEEG SGELLCMNRT TVFLRGAGGF SNSSQPFSYK NYPSNQGLAV KIPQRQPLTV CEERTQPSQA
201: LLYRLSGDYN PLHSDPEFAK LAGFPRPILH GLCTLGFAIK AIIKCVCKGD PTAVKTISGR FLTTVFPGET LITEMWLEGL RVIYQTKVKE RNKTVLAGYV
301: DIRGLSSSL

Arabidopsis Description

ECH2Enoyl-CoA hydratase 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8VYI3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.