Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G346200.2 | Wheat | peroxisome | 93.85 | 92.99 |
| TraesCS5B01G339100.1 | Wheat | peroxisome | 92.62 | 91.77 |
| Os09t0544900-01 | Rice | cytosol | 80.0 | 82.54 |
| HORVU5Hr1G085520.1 | Barley | mitochondrion | 92.0 | 75.51 |
| EER99285 | Sorghum | cytosol | 80.31 | 75.0 |
| Bra015782.1-P | Field mustard | cytosol | 58.15 | 63.21 |
| CDX73237 | Canola | cytosol | 58.15 | 63.21 |
| KRH51640 | Soybean | nucleus | 59.38 | 62.66 |
| CDX87634 | Canola | cytosol | 56.92 | 61.87 |
| KRH60966 | Soybean | cytosol, nucleus, peroxisome | 59.08 | 61.15 |
| VIT_18s0001g00490.t01 | Wine grape | cytosol, peroxisome, plastid | 57.54 | 61.11 |
| AT1G76150.1 | Thale cress | cytosol, nucleus, peroxisome | 57.54 | 60.52 |
| GSMUA_Achr11P... | Banana | cytosol, golgi, peroxisome | 59.08 | 59.81 |
| Solyc12g094450.1.1 | Tomato | cytosol | 56.0 | 58.71 |
| PGSC0003DMT400075400 | Potato | cytosol | 56.0 | 53.69 |
| Zm00001d023647_P001 | Maize | cytosol, mitochondrion | 17.23 | 47.06 |
| Zm00001d036800_P001 | Maize | peroxisome | 25.54 | 32.68 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G341000.1 | EnsemblPlantsGene:TraesCS5A01G341000 | Gene3D:3.10.129.10 | InterPro:HotDog_dom_sf | InterPro:MaoC_dom | InterPro:Mfe-2 |
| PANTHER:PTHR13078 | PFAM:PF01575 | PFAM:PF13452 | SUPFAM:SSF54637 | TIGR:cd03448 | MapMan:5.7.3.3.1 |
Description
No Description!
Coordinates
chr5A:-:547338722..547346108
Molecular Weight (calculated)
35585.3 Da
IEP (calculated)
7.677
GRAVY (calculated)
-0.186
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MATNERTVAS VDPDVALAYR FPEVSFAYDE RDVALYALGV GACGADAVDD KELHLVHHRD SQRHIKVLPT FVSLFPNKNS NGRGIVNVPG IHFDESLLLH
101: GQQYIEIYKP IPSCASVVNK VKVAGLHDKG KATILEIETT TSLKDSGEVL CMNRSTIFLR GAGGFSDSSR PYSYTTYPAN QISRISIPNS TPSAVHEDQT
201: QQSQALLYRL SGDYNPLHSD PMVAQIAGFT RPILHGLCTL GFAARAVIKS FCNGDPAAVR NIFGRFLLHV YPGETLVTEM WVDGQRVQYQ TKAKERDRAV
301: LSGYVLLKHI PSSLSSHADN GGGRL
101: GQQYIEIYKP IPSCASVVNK VKVAGLHDKG KATILEIETT TSLKDSGEVL CMNRSTIFLR GAGGFSDSSR PYSYTTYPAN QISRISIPNS TPSAVHEDQT
201: QQSQALLYRL SGDYNPLHSD PMVAQIAGFT RPILHGLCTL GFAARAVIKS FCNGDPAAVR NIFGRFLLHV YPGETLVTEM WVDGQRVQYQ TKAKERDRAV
301: LSGYVLLKHI PSSLSSHADN GGGRL
001: MATSDSEFNS DLLLAHKLPE TRYTYNERDV AIYALGIGAC GQDAVDSDEL KFVYHRNGQD LIQVLPTFAS LFTLGSLTEG LDLPGFKYDP SLLLHGQQYI
101: EIYRPLPSKA SLINKVSLAG LQDKGKAAIL ELETRSYEEG SGELLCMNRT TVFLRGAGGF SNSSQPFSYK NYPSNQGLAV KIPQRQPLTV CEERTQPSQA
201: LLYRLSGDYN PLHSDPEFAK LAGFPRPILH GLCTLGFAIK AIIKCVCKGD PTAVKTISGR FLTTVFPGET LITEMWLEGL RVIYQTKVKE RNKTVLAGYV
301: DIRGLSSSL
101: EIYRPLPSKA SLINKVSLAG LQDKGKAAIL ELETRSYEEG SGELLCMNRT TVFLRGAGGF SNSSQPFSYK NYPSNQGLAV KIPQRQPLTV CEERTQPSQA
201: LLYRLSGDYN PLHSDPEFAK LAGFPRPILH GLCTLGFAIK AIIKCVCKGD PTAVKTISGR FLTTVFPGET LITEMWLEGL RVIYQTKVKE RNKTVLAGYV
301: DIRGLSSSL
Arabidopsis Description
ECH2Enoyl-CoA hydratase 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8VYI3]
SUBAcon: [cytosol,nucleus,peroxisome]
SUBAcon: [cytosol,nucleus,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.