Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400029968 | Potato | mitochondrion | 52.38 | 41.51 |
| HORVU5Hr1G014740.1 | Barley | mitochondrion | 54.76 | 37.1 |
| HORVU3Hr1G097430.1 | Barley | mitochondrion | 54.76 | 37.1 |
| HORVU4Hr1G049950.1 | Barley | mitochondrion | 71.43 | 34.48 |
| HORVU7Hr1G045140.1 | Barley | plastid | 71.43 | 11.67 |
| VIT_15s0046g02140.t01 | Wine grape | mitochondrion | 64.29 | 11.64 |
| PGSC0003DMT400081319 | Potato | mitochondrion | 61.9 | 11.35 |
| PGSC0003DMT400082454 | Potato | mitochondrion | 61.9 | 11.35 |
| Solyc09g075370.2.1 | Tomato | mitochondrion | 59.52 | 10.92 |
| KRH06571 | Soybean | mitochondrion | 57.14 | 10.53 |
| KRH36505 | Soybean | mitochondrion | 57.14 | 10.53 |
| KRH11491 | Soybean | mitochondrion | 57.14 | 10.43 |
| AT1G14620.1 | Thale cress | mitochondrion | 52.38 | 9.44 |
| CDX95682 | Canola | mitochondrion | 52.38 | 9.21 |
| CDX83379 | Canola | mitochondrion | 52.38 | 9.21 |
| Bra000413.1-P | Field mustard | mitochondrion | 52.38 | 9.21 |
| Bra039289.1-P | Field mustard | mitochondrion | 50.0 | 8.9 |
| CDY37090 | Canola | mitochondrion | 52.38 | 8.27 |
| Solyc04g009140.2.1 | Tomato | cytosol | 19.05 | 3.54 |
| Bra004566.1-P | Field mustard | cytosol | 2.38 | 0.66 |
| CDY42008 | Canola | cytosol, mitochondrion | 0.0 | 0.0 |
| PGSC0003DMT400029970 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G095440.1 | EnsemblPlantsGene:HORVU7Hr1G095440 | UniParc:UPI000B481E38 | UniProt:A0A287XF39 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr7H:+:582419058..582419753
Molecular Weight (calculated)
4614.7 Da
IEP (calculated)
9.123
GRAVY (calculated)
0.679
Length
42 amino acids
Sequence
(BLAST)
(BLAST)
1: GKIVVAVVFE RLPVVIPKIH PIVYAFQEFS YSRSSAIPAE GV
001: MPRSSLRLLA KPLLESRRGF CTSSDKIVAS VLFERLRVVI PKPDPAVYAF QEFKFNWQQQ FRRRYPDEFL DIAKNRAKGE YQMDYVPAPR ITEADKNNDR
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKVLLQ MQCSSSIEIR
201: HKQLRGFCVG NQRRALGILP
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKVLLQ MQCSSSIEIR
201: HKQLRGFCVG NQRRALGILP
Arabidopsis Description
DECOYAt1g14620/T5E21_15 [Source:UniProtKB/TrEMBL;Acc:Q8L7U3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.