Factsheet for PGSC0003DMT400029968

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 5
plastid 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion, nucleus, plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G095440.1	Barley	extracellular, vacuole	41.51	52.38
PGSC0003DMT400082454	Potato	mitochondrion	98.11	22.71
PGSC0003DMT400081319	Potato	mitochondrion	90.57	20.96
VIT_15s0046g02140.t01	Wine grape	mitochondrion	62.26	14.22
Os06t0300600-01	Rice	cytosol, mitochondrion	60.38	12.9
GSMUA_Achr3P10850_001	Banana	mitochondrion	56.6	12.77
Zm00001d045819_P001	Maize	mitochondrion	58.49	12.7
EER97653	Sorghum	mitochondrion	56.6	12.66
EER89645	Sorghum	mitochondrion	58.49	12.6
TraesCS7A01G220600.2	Wheat	mitochondrion	58.49	12.6
KRH36505	Soybean	mitochondrion	52.83	12.28
KRH06571	Soybean	mitochondrion	49.06	11.4
KRH11491	Soybean	mitochondrion	49.06	11.3
AT1G14620.1	Thale cress	mitochondrion	45.28	10.3
CDX95682	Canola	mitochondrion	45.28	10.04
CDX83379	Canola	mitochondrion	45.28	10.04
Bra000413.1-P	Field mustard	mitochondrion	45.28	10.04
Bra039289.1-P	Field mustard	mitochondrion	43.4	9.75
CDY37090	Canola	mitochondrion	45.28	9.02
Solyc04g009140.2.1	Tomato	cytosol	11.32	2.65
Bra004566.1-P	Field mustard	cytosol	1.89	0.66
CDY42008	Canola	cytosol, mitochondrion	0.0	0.0
PGSC0003DMT400029970	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400029968

EnsemblPlantsGene:PGSC0003DMG401011505

PGSC:PGSC0003DMG401011505

UniParc:UPI0002948765

UniProt:M1ATL4

MapMan:35.2

Description

DECOY [Source:PGSC_GENE;Acc:PGSC0003DMG401011505]

Coordinates

chr4:-:4685192..4685496

Molecular Weight (calculated)

5896.1 Da

IEP (calculated)

9.495

GRAVY (calculated)

0.042

Length

53 amino acids

Sequence
(BLAST)

1: MQRCCSSAGR SAIGKRWFSS SNNDKIVASV LFERLPVVVP TINPTVYAFQ EFS

Best Arabidopsis Sequence Match ( AT1G14620.2 )
(BLAST)

001: MPRSSLRLLA KPLLESRRGF CTSSDKIVAS VLFERLRVVI PKPDPAVYAF QEFKFNWQQQ FRRRYPDEFL DIAKNRAKGE YQMDYVPAPR ITEADKNNDR
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKVLLQ MQCSSSIEIR
201: HKQLRGFCVG NQRRALGILP

Arabidopsis Description

DECOYAt1g14620/T5E21_15 [Source:UniProtKB/TrEMBL;Acc:Q8L7U3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.