Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 7
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| mitochondrion:
27297264
mitochondrion: 29575040 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
29575040
doi
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89645 | Sorghum | mitochondrion | 97.54 | 96.75 |
| Os06t0300600-01 | Rice | cytosol, mitochondrion | 79.51 | 78.23 |
| TraesCS7A01G220600.2 | Wheat | mitochondrion | 78.69 | 78.05 |
| KRH06571 | Soybean | mitochondrion | 68.44 | 73.25 |
| KRH11491 | Soybean | mitochondrion | 68.44 | 72.61 |
| HORVU7Hr1G045140.1 | Barley | plastid | 76.23 | 72.37 |
| KRH36505 | Soybean | mitochondrion | 67.62 | 72.37 |
| GSMUA_Achr3P10850_001 | Banana | mitochondrion | 68.44 | 71.06 |
| VIT_15s0046g02140.t01 | Wine grape | mitochondrion | 65.57 | 68.97 |
| HORVU4Hr1G049950.1 | Barley | mitochondrion | 24.18 | 67.82 |
| Solyc09g075370.2.1 | Tomato | mitochondrion | 61.89 | 65.94 |
| PGSC0003DMT400082454 | Potato | mitochondrion | 61.89 | 65.94 |
| PGSC0003DMT400081319 | Potato | mitochondrion | 61.89 | 65.94 |
| AT1G14620.1 | Thale cress | mitochondrion | 59.02 | 61.8 |
| Bra000413.1-P | Field mustard | mitochondrion | 60.25 | 61.51 |
| CDX83379 | Canola | mitochondrion | 60.25 | 61.51 |
| Bra039289.1-P | Field mustard | mitochondrion | 58.61 | 60.59 |
| CDX95682 | Canola | mitochondrion | 59.02 | 60.25 |
| HORVU3Hr1G097430.1 | Barley | mitochondrion | 15.16 | 59.68 |
| HORVU5Hr1G014740.1 | Barley | mitochondrion | 15.16 | 59.68 |
| PGSC0003DMT400029968 | Potato | mitochondrion | 12.7 | 58.49 |
| PGSC0003DMT400029970 | Potato | cytosol | 14.75 | 55.38 |
| Solyc04g009140.2.1 | Tomato | cytosol | 51.23 | 55.31 |
| CDY37090 | Canola | mitochondrion | 59.02 | 54.14 |
| CDY42008 | Canola | cytosol, mitochondrion | 29.1 | 44.65 |
| Bra004566.1-P | Field mustard | cytosol | 27.46 | 44.08 |
Protein Annotations
| EnsemblPlants:Zm00001d045819_P001 | EnsemblPlants:Zm00001d045819_T001 | EnsemblPlantsGene:Zm00001d045819 | Gene3D:3.90.79.10 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | PANTHER:PTHR13124 | ProteinID:AQL03280.1 | SEG:seg |
| UniParc:UPI000221FFBC | UniProt:K7W866 | MapMan:35.2 | : | : | : |
Description
decoy
Coordinates
chr9:-:41248926..41252992
Molecular Weight (calculated)
28010.5 Da
IEP (calculated)
9.502
GRAVY (calculated)
-0.402
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSRLPATVS LLRRSLREPR GFSSSVLASS KETADGKLVA SVLFERLPVV IPKIHPVVYA FQEFSFRWRQ QYRRQYPEEV LGKADARGKG DYHIDYVPAP
101: RITEADKTND RKSLQRALDN KLYLLLYGNA YGAPDGKPVW HFPEKVYENE ETMRLCAEAA LKSVLGGLDH TYFVGNAPMA HMAVEQTDSS VSSFKRFFFK
201: SQVVGTTKYH VGKCNDFAWV TKDELLEYFP ENKDFFNKMI IHIR
101: RITEADKTND RKSLQRALDN KLYLLLYGNA YGAPDGKPVW HFPEKVYENE ETMRLCAEAA LKSVLGGLDH TYFVGNAPMA HMAVEQTDSS VSSFKRFFFK
201: SQVVGTTKYH VGKCNDFAWV TKDELLEYFP ENKDFFNKMI IHIR
001: MPRSSLRLLA KPLLESRRGF CTSSDKIVAS VLFERLRVVI PKPDPAVYAF QEFKFNWQQQ FRRRYPDEFL DIAKNRAKGE YQMDYVPAPR ITEADKNNDR
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKRFFF KCSVVAASKY
201: DISNCEDFVW VTKDELLEFF PEQAEFFNKM IIS
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKRFFF KCSVVAASKY
201: DISNCEDFVW VTKDELLEFF PEQAEFFNKM IIS
Arabidopsis Description
DECOYAt1g14620/T5E21_15 [Source:UniProtKB/TrEMBL;Acc:Q8L7U3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.