Factsheet for GSMUA_Achr3P10850_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06571	Soybean	mitochondrion	69.79	71.93
VIT_15s0046g02140.t01	Wine grape	mitochondrion	70.64	71.55
KRH11491	Soybean	mitochondrion	69.79	71.3
KRH36505	Soybean	mitochondrion	68.94	71.05
EER97653	Sorghum	mitochondrion	71.49	70.89
Os06t0300600-01	Rice	cytosol, mitochondrion	74.47	70.56
PGSC0003DMT400081319	Potato	mitochondrion	67.23	69.0
EER89645	Sorghum	mitochondrion	71.91	68.7
Solyc09g075370.2.1	Tomato	mitochondrion	66.81	68.56
PGSC0003DMT400082454	Potato	mitochondrion	66.81	68.56
Zm00001d045819_P001	Maize	mitochondrion	71.06	68.44
TraesCS7A01G220600.2	Wheat	mitochondrion	69.79	66.67
HORVU7Hr1G045140.1	Barley	plastid	71.91	65.76
AT1G14620.1	Thale cress	mitochondrion	64.68	65.24
PGSC0003DMT400029970	Potato	cytosol	17.87	64.62
Bra039289.1-P	Field mustard	mitochondrion	63.83	63.56
CDX95682	Canola	mitochondrion	63.4	62.34
CDX83379	Canola	mitochondrion	63.4	62.34
Bra000413.1-P	Field mustard	mitochondrion	63.4	62.34
Solyc04g009140.2.1	Tomato	cytosol	57.45	59.73
HORVU4Hr1G049950.1	Barley	mitochondrion	21.28	57.47
CDY37090	Canola	mitochondrion	64.26	56.77
PGSC0003DMT400029968	Potato	mitochondrion	12.77	56.6
HORVU5Hr1G014740.1	Barley	mitochondrion	11.91	45.16
HORVU3Hr1G097430.1	Barley	mitochondrion	11.91	45.16
CDY42008	Canola	cytosol, mitochondrion	30.21	44.65
Bra004566.1-P	Field mustard	cytosol	28.51	44.08
GSMUA_Achr9P19750_001	Banana	cytosol	11.06	19.26

Protein Annotations

EnsemblPlants:GSMUA_Achr3P10850_001	EnsemblPlants:GSMUA_Achr3T10850_001	EnsemblPlantsGene:GSMUA_Achr3G10850_001	Gene3D:3.90.79.10	PANTHER:PTHR13124	SEG:seg
UniParc:UPI000296727D	UniProt:M0SDK2	MapMan:35.2	:	:	:

Description

Putative 39S ribosomal protein L46, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr3G10850_001]

Coordinates

chr3:-:8026809..8031660

Molecular Weight (calculated)

27064.6 Da

IEP (calculated)

9.673

GRAVY (calculated)

-0.351

Length

235 amino acids

Sequence
(BLAST)

001: MRRSVAPLLL RSRRFASSTA VSGISSSSSD KIVAAVLFER LPVVIPKIEP IVYAFREFSF RWRQQYRRKY PDEVLGKADA RGKGDYQTDY VPAPRITEAD
101: KTNDKRSLQR ALDRRLYLLL YGSTYGTPDK EPVWHFPEKV YENEETLRLC AESALKSVIG GLNNTYFVGN APMAQMVVEP KEDLPLFKRF FFKSQVIGAS
201: KLQIGECKDF VWVTKDELME YFPEQASFFN KMIIS

Best Arabidopsis Sequence Match ( AT1G14620.1 )
(BLAST)

001: MPRSSLRLLA KPLLESRRGF CTSSDKIVAS VLFERLRVVI PKPDPAVYAF QEFKFNWQQQ FRRRYPDEFL DIAKNRAKGE YQMDYVPAPR ITEADKNNDR
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKRFFF KCSVVAASKY
201: DISNCEDFVW VTKDELLEFF PEQAEFFNKM IIS

Arabidopsis Description

DECOYAt1g14620/T5E21_15 [Source:UniProtKB/TrEMBL;Acc:Q8L7U3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.