Factsheet for VIT_15s0046g02140.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8
cytosol 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06571	Soybean	mitochondrion	77.59	78.95
KRH36505	Soybean	mitochondrion	77.16	78.51
KRH11491	Soybean	mitochondrion	76.72	77.39
PGSC0003DMT400081319	Potato	mitochondrion	75.0	75.98
Solyc09g075370.2.1	Tomato	mitochondrion	74.57	75.55
PGSC0003DMT400082454	Potato	mitochondrion	73.28	74.24
PGSC0003DMT400029970	Potato	cytosol	20.26	72.31
GSMUA_Achr3P10850_001	Banana	mitochondrion	71.55	70.64
AT1G14620.1	Thale cress	mitochondrion	69.83	69.53
Bra039289.1-P	Field mustard	mitochondrion	69.83	68.64
Bra000413.1-P	Field mustard	mitochondrion	69.4	67.36
CDX83379	Canola	mitochondrion	69.4	67.36
Os06t0300600-01	Rice	cytosol, mitochondrion	71.12	66.53
CDX95682	Canola	mitochondrion	68.53	66.53
EER97653	Sorghum	mitochondrion	67.24	65.82
Zm00001d045819_P001	Maize	mitochondrion	68.97	65.57
EER89645	Sorghum	mitochondrion	68.53	64.63
HORVU7Hr1G095440.1	Barley	extracellular, vacuole	11.64	64.29
Solyc04g009140.2.1	Tomato	cytosol	62.07	63.72
TraesCS7A01G220600.2	Wheat	mitochondrion	67.24	63.41
PGSC0003DMT400029968	Potato	mitochondrion	14.22	62.26
CDY37090	Canola	mitochondrion	70.26	61.28
CDY42008	Canola	cytosol, mitochondrion	33.19	48.43
Bra004566.1-P	Field mustard	cytosol	31.03	47.37

Protein Annotations

EntrezGene:104881917	Gene3D:3.90.79.10	MapMan:35.2	EMBL:AM425490	ProteinID:CAN73362	ProteinID:CAN73362.1
ProteinID:CBI40412	ProteinID:CBI40412.3	UniProt:D7UCE7	EMBL:FN596755	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005762	GO:GO:0005840	PANTHER:PTHR13124	UniParc:UPI00015CAD16	ArrayExpress:VIT_15s0046g02140	EnsemblPlantsGene:VIT_15s0046g02140
EnsemblPlants:VIT_15s0046g02140.t01	unigene:Vvi.11675	RefSeq:XP_010661810.1	:	:	:

Description

No Description!

Coordinates

chr15:+:18936176..18939925

Molecular Weight (calculated)

26981.2 Da

IEP (calculated)

8.725

GRAVY (calculated)

-0.471

Length

232 amino acids

Sequence
(BLAST)

001: MRRTFTSLAR SLPPARGFCT STSEKIVASV LFERLPVVIP KIDPVVYAFQ EFSFRWRQQY RRKYPDEIFK RSEERGKGDY QIDYVPAPRV TEADENNDRR
101: SLQRALDRRL YLLLFGTTYG APDGKPVWHF PEKVYGSEET LRKCAESALE SVIGDLSHTY FVGNAPFAHM VIQPTENVPD LPSFKRFFFK SQVIATNKYD
201: VGKCKDHVWV TKDELVEYFP EQAEFLNKMI IG

Best Arabidopsis Sequence Match ( AT1G14620.1 )
(BLAST)

001: MPRSSLRLLA KPLLESRRGF CTSSDKIVAS VLFERLRVVI PKPDPAVYAF QEFKFNWQQQ FRRRYPDEFL DIAKNRAKGE YQMDYVPAPR ITEADKNNDR
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKRFFF KCSVVAASKY
201: DISNCEDFVW VTKDELLEFF PEQAEFFNKM IIS

Arabidopsis Description

DECOYAt1g14620/T5E21_15 [Source:UniProtKB/TrEMBL;Acc:Q8L7U3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.