CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36505	Soybean	mitochondrion	93.86	93.86
KRH11491	Soybean	mitochondrion	92.98	92.17
PGSC0003DMT400029970	Potato	cytosol	22.37	78.46
VIT_15s0046g02140.t01	Wine grape	mitochondrion	78.95	77.59
Solyc09g075370.2.1	Tomato	mitochondrion	74.56	74.24
PGSC0003DMT400081319	Potato	mitochondrion	74.56	74.24
PGSC0003DMT400082454	Potato	mitochondrion	73.25	72.93
GSMUA_Achr3P10850_001	Banana	mitochondrion	71.93	69.79
AT1G14620.1	Thale cress	mitochondrion	71.05	69.53
Zm00001d045819_P001	Maize	mitochondrion	73.25	68.44
EER97653	Sorghum	mitochondrion	70.61	67.93
EER89645	Sorghum	mitochondrion	73.25	67.89
Bra039289.1-P	Field mustard	mitochondrion	69.74	67.37
Os06t0300600-01	Rice	cytosol, mitochondrion	73.25	67.34
CDX83379	Canola	mitochondrion	70.18	66.95
Bra000413.1-P	Field mustard	mitochondrion	70.18	66.95
CDX95682	Canola	mitochondrion	68.86	65.69
TraesCS7A01G220600.2	Wheat	mitochondrion	70.61	65.45
Solyc04g009140.2.1	Tomato	cytosol	64.47	65.04
CDY37090	Canola	mitochondrion	69.74	59.77
HORVU7Hr1G095440.1	Barley	extracellular, vacuole	10.53	57.14
PGSC0003DMT400029968	Potato	mitochondrion	11.4	49.06
CDY42008	Canola	cytosol, mitochondrion	33.33	47.8
Bra004566.1-P	Field mustard	cytosol	31.14	46.71

Protein Annotations

EntrezGene:100807270	Gene3D:3.90.79.10	MapMan:35.2	EMBL:ACUP02009850	ncoils:Coil	EnsemblPlantsGene:GLYMA_16G031500
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005762	GO:GO:0005840	UniProt:I1MKR3	ProteinID:KRH06570.1
EnsemblPlants:KRH06571	ProteinID:KRH06571	ProteinID:KRH06571.1	PANTHER:PTHR13124	UniParc:UPI000233E4C0	SEG:seg

Description

hypothetical protein

Coordinates

chr16:-:2956024..2960535

Molecular Weight (calculated)

26493.5 Da

IEP (calculated)

8.588

GRAVY (calculated)

-0.466

Length

228 amino acids

Sequence
(BLAST)

001: MKMSLVWPLL TRRGFSTSSE NLVASVLFER LPVVIPKIDP VVYAFQEFSF RWRQQYQRRY PDEFLDKSDA RGKGDYQIDY VPAPRITEAD QSNDRRSLQR
101: ALDRRLYLLL YGNAYGAPSG KPVWHFPEKV YESEDTMRKC AESALKSVIG DLSNTYFVGN APMAHMVVQP TENQSGSTSF KRFFFKSQVI AKNKFDIGKC
201: EDFVWVTKDE LTEYFPEQAE FLNKMIIS

Best Arabidopsis Sequence Match ( AT1G14620.1 )
(BLAST)

001: MPRSSLRLLA KPLLESRRGF CTSSDKIVAS VLFERLRVVI PKPDPAVYAF QEFKFNWQQQ FRRRYPDEFL DIAKNRAKGE YQMDYVPAPR ITEADKNNDR
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKRFFF KCSVVAASKY
201: DISNCEDFVW VTKDELLEFF PEQAEFFNKM IIS

Arabidopsis Description

DECOYAt1g14620/T5E21_15 [Source:UniProtKB/TrEMBL;Acc:Q8L7U3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.