CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
extracellular 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039289.1-P	Field mustard	mitochondrion	87.97	99.15
AT1G14620.1	Thale cress	mitochondrion	81.95	93.56
CDX83379	Canola	mitochondrion	83.83	93.31
CDX95682	Canola	mitochondrion	82.71	92.05
KRH36505	Soybean	mitochondrion	60.9	71.05
KRH11491	Soybean	mitochondrion	61.28	70.87
VIT_15s0046g02140.t01	Wine grape	mitochondrion	61.28	70.26
KRH06571	Soybean	mitochondrion	59.77	69.74
PGSC0003DMT400029970	Potato	cytosol	16.54	67.69
CDY42008	Canola	cytosol, mitochondrion	39.47	66.04
PGSC0003DMT400081319	Potato	mitochondrion	55.64	64.63
GSMUA_Achr3P10850_001	Banana	mitochondrion	56.77	64.26
Solyc09g075370.2.1	Tomato	mitochondrion	55.26	64.19
PGSC0003DMT400082454	Potato	mitochondrion	54.89	63.76
Os06t0300600-01	Rice	cytosol, mitochondrion	57.14	61.29
Zm00001d045819_P001	Maize	mitochondrion	54.14	59.02
EER97653	Sorghum	mitochondrion	52.26	58.65
EER89645	Sorghum	mitochondrion	54.14	58.54
TraesCS7A01G220600.2	Wheat	mitochondrion	52.63	56.91
Solyc04g009140.2.1	Tomato	cytosol	47.74	56.19
HORVU7Hr1G095440.1	Barley	extracellular, vacuole	8.27	52.38
PGSC0003DMT400029968	Potato	mitochondrion	9.02	45.28

Protein Annotations

EnsemblPlants:CDY37090	EnsemblPlantsGene:GSBRNA2T00063299001	Gene3D:3.90.79.10	PANTHER:PTHR13124	ProteinID:CDY37090	ProteinID:CDY37090.1
UniParc:UPI0004EDEC08	UniProt:A0A078HFD6	MapMan:35.2	:	:	:

Description

BnaA04g26680DBnaA04g26680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFD6]

Coordinates

chrLK032390:+:358749..360723

Molecular Weight (calculated)

31109.5 Da

IEP (calculated)

9.361

GRAVY (calculated)

-0.336

Length

266 amino acids

Sequence
(BLAST)

001: MLDSLFKPIR KTLTGSVYFR FQSLLLFFLE MQRLRSQLLA RPLLESRLRG YCTSSSSEKI VASVLFERLR VVIPKPDPTV YAFQEFKFNW QQQFRRRYPD
101: EFLDIAKNRA KGEYQMDYVP APRVTEADKN NDKKSLYRAL DKKLYLLVFG KPFGATSDKP VWHFPEKVYD SEPTLRKCAE SALKSVLGDL THTYFVGNAP
201: MAHMAIQPTE ETPDLPSYKR FFFKCSVVAA SKYNISNCED FVWVTKDELL EFFPEQAEFF NKMIIS

Best Arabidopsis Sequence Match ( AT1G14620.1 )
(BLAST)

001: MPRSSLRLLA KPLLESRRGF CTSSDKIVAS VLFERLRVVI PKPDPAVYAF QEFKFNWQQQ FRRRYPDEFL DIAKNRAKGE YQMDYVPAPR ITEADKNNDR
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKRFFF KCSVVAASKY
201: DISNCEDFVW VTKDELLEFF PEQAEFFNKM IIS

Arabidopsis Description

DECOYAt1g14620/T5E21_15 [Source:UniProtKB/TrEMBL;Acc:Q8L7U3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.