Factsheet for Solyc04g009140.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029970	Potato	cytosol	27.43	95.38
Solyc09g075370.2.1	Tomato	mitochondrion	78.76	77.73
PGSC0003DMT400082454	Potato	mitochondrion	78.76	77.73
KRH06571	Soybean	mitochondrion	65.04	64.47
KRH36505	Soybean	mitochondrion	63.72	63.16
KRH11491	Soybean	mitochondrion	63.72	62.61
VIT_15s0046g02140.t01	Wine grape	mitochondrion	63.72	62.07
GSMUA_Achr3P10850_001	Banana	mitochondrion	59.73	57.45
AT1G14620.1	Thale cress	mitochondrion	57.08	55.36
Bra039289.1-P	Field mustard	mitochondrion	56.19	53.81
Bra000413.1-P	Field mustard	mitochondrion	56.64	53.56
CDX83379	Canola	mitochondrion	56.64	53.56
Os06t0300600-01	Rice	cytosol, mitochondrion	57.52	52.42
CDX95682	Canola	mitochondrion	55.31	52.3
EER97653	Sorghum	mitochondrion	53.98	51.48
Zm00001d045819_P001	Maize	mitochondrion	55.31	51.23
TraesCS7A01G220600.2	Wheat	mitochondrion	55.75	51.22
EER89645	Sorghum	mitochondrion	55.31	50.81
CDY42008	Canola	cytosol, mitochondrion	34.96	49.69
Bra004566.1-P	Field mustard	cytosol	32.74	48.68
CDY37090	Canola	mitochondrion	56.19	47.74
HORVU7Hr1G095440.1	Barley	extracellular, vacuole	3.54	19.05
PGSC0003DMT400029968	Potato	mitochondrion	2.65	11.32

Protein Annotations

EnsemblPlants:Solyc04g009140.2.1	EnsemblPlantsGene:Solyc04g009140.2	Gene3D:3.90.79.10	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005762
GO:GO:0005840	PANTHER:PTHR13124	UniParc:UPI00027655D4	UniProt:K4BP70	MapMan:35.2	:

Description

No Description!

Coordinates

chr4:-:2651223..2653938

Molecular Weight (calculated)

26734.9 Da

IEP (calculated)

8.807

GRAVY (calculated)

-0.615

Length

226 amino acids

Sequence
(BLAST)

001: MNFNPSPKPI YFNPSPKPIT LPQISFHFQY CGIWVFRVYE NAEVLFICDR FRWRQQYRRE YPESFLKKSD TRGKGDYQID YKPAPRISEA DKTNDQRSLQ
101: RALDKRLYLL VHGTTQGSGK PVWHFPEKVY ESEENLRKCA ESALESFIGD LSHTYFVGNA PMGHMVMQPT EDKKIPSIKR FFFKSQVIAA NKFDIRKCDD
201: FVWVTKDELL EYFPEQAEFL NKMIIS

Best Arabidopsis Sequence Match ( AT1G14620.1 )
(BLAST)

001: MPRSSLRLLA KPLLESRRGF CTSSDKIVAS VLFERLRVVI PKPDPAVYAF QEFKFNWQQQ FRRRYPDEFL DIAKNRAKGE YQMDYVPAPR ITEADKNNDR
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKRFFF KCSVVAASKY
201: DISNCEDFVW VTKDELLEFF PEQAEFFNKM IIS

Arabidopsis Description

DECOYAt1g14620/T5E21_15 [Source:UniProtKB/TrEMBL;Acc:Q8L7U3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.